RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 SMCO1Q147U7 214 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 OR8B8Q15620 311 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 UBE2V2Q15819 145 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SRSF7Q16629 238 aaKnown RBP eCLIP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 RSPO1Q2MKA7 263 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 KRTAP27-1Q3LI81 207 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SFRP5Q5T4F7 317 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 TMEM42Q69YG0 159 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 TMEM211Q6ICI0 200 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 OR52W1Q6IF63 320 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 PRSS54Q6PEW0 395 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 DHRS11Q6UWP2 260 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 ALKAL2Q6UX46 152 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 MEX3BQ6ZN04 569 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 GALNTL5Q7Z4T8 443 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SGPP2Q8IWX5 399 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SAXO1Q8IYX7 474 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 GVQW1Q8N7I0 195 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 TMEM104Q8NE00 496 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 BVESQ8NE79 360 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 STOML3Q8TAV4 291 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 CASTOR1Q8WTX7 329 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 RNF141Q8WVD5 230 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 PIGTQ969N2 578 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SAT2Q96F10 170 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 BORCS8Q96FH0 119 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 REEP6Q96HR9 211 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SEC22AQ96IW7 307 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 KIRREL1Q96J84 757 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 ZNF385AQ96PM9 386 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 FANCD2OSQ96PS1 177 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 DIRC2Q96SL1 478 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 FAM173AQ9BQD7 235 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 MESP1Q9BRJ9 268 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 NICN1Q9BSH3 213 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 ST6GALNAC5Q9BVH7 336 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 ZNF471Q9BX82 626 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SHARPINQ9H0F6 387 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 BANF2Q9H503 90 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 OPA3Q9H6K4 179 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 METTL8Q9H825 291 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 ELL3Q9HB65 397 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 DECR2Q9NUI1 292 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 NECAP2Q9NVZ3 263 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 GTF3C1Q12789 2109 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 IGKV3D-15A0A087WSY6 115 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 A0A0A6YYD4 124 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ZNF816-ZNF321PA0A0X1KG74 233 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ZNF716A6NP11 495 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ZNF724A8MTY0 619 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 RPL36A-HNRNPH2H7BZ11 118 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 C19orf84I3L1E1 186 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SMAD9O15198 467 aaKnown RBP4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SYNGR3O43761 229 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 CXCL13O43927 109 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 MRPL33O75394 65 aaKnown RBP4.36□□□□□ -1.71
PTPRK-213ENST00000490332 TRAPPC6AO75865 159 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SPDEFO95238 335 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 HTR3BO95264 441 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 NRASP01111 189 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 HPNP05981 417 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 GLAP06280 429 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 CTXN2P0C2S0 81 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 PGAM2P15259 253 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ZNF250P15622 560 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 FAHP16930 419 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SERPINA2P20848 420 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 OTX2P32243 289 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ARR3P36575 388 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 NPY4RP50391 375 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 BLOC1S1P78537 153 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SRPXP78539 464 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 MALLQ13021 153 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 AIMP2Q13155 320 aaKnown RBP4.36□□□□□ -1.71
PTPRK-213ENST00000490332 PHYHD1Q5SRE7 291 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ABHD17BQ5VST6 288 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 YRDCQ86U90 279 aaKnown RBP4.36□□□□□ -1.71
PTPRK-213ENST00000490332 BAP18Q8IXM2 172 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 FAM185AQ8N0U4 392 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 OSR2Q8N2R0 312 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 LRRC18Q8N456 261 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 CCDC71LQ8N9Z2 235 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ADAD2Q8NCV1 583 aaKnown RBP4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SLC30A7Q8NEW0 376 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 WFDC11Q8NEX6 87 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 OR5T2Q8NGG2 359 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 OR10K1Q8NGX5 313 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 OR10D3Q8NH80 312 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 CT55Q8WUE5 264 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SPSB4Q96A44 273 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 FBXO17Q96EF6 278 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 ADGRG7Q96K78 797 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 LYZL4Q96KX0 146 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 Q96M66 194 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 FOXB1Q99853 325 aa4.36□□□□□ -1.71
PTPRK-213ENST00000490332 CMSS1Q9BQ75 279 aaKnown RBP4.36□□□□□ -1.71
PTPRK-213ENST00000490332 RTBDNQ9BSG5 229 aaPredicted RBP4.36□□□□□ -1.71
PTPRK-213ENST00000490332 SUCNR1Q9BXA5 334 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms