RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 POMKQ9H5K3 350 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 ZNF443Q9Y2A4 671 aaPredicted RBP1.74□□□□□ -2.13
CD46-216ENST00000490278 TRIOBPQ9H2D6 2365 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 DYSFO75923 2080 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 MIA3Q5JRA6 1907 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 DHX57Q6P158 1386 aaKnown RBP1.73□□□□□ -2.13
CD46-216ENST00000490278 PGPA6NDG6 321 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 MGAT4DA6NG13 374 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 ZNF878C9JN71 531 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 H3BMM0 161 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 hCG_2039718K7EN88 272 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 NDUFS8O00217 210 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 SLC31A1O15431 190 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 CCDC172P0C7W6 258 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 LGALS7P47929 136 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 SPICQ8N5J4 248 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 ZNF738Q8NE65 137 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 APOBEC3DQ96AK3 386 aaPredicted RBP1.73□□□□□ -2.13
CD46-216ENST00000490278 UBE2WQ96B02 151 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 SLC25A44Q96H78 314 aaPredicted RBP1.73□□□□□ -2.13
CD46-216ENST00000490278 PYURFQ96I23 114 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 OLFM3Q96PB7 478 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 TRIB3Q96RU7 358 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 ULBP1Q9BZM6 244 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 RBMX2Q9Y388 322 aaKnown RBP1.73□□□□□ -2.13
CD46-216ENST00000490278 VWA8A3KMH1 1905 aa1.73□□□□□ -2.13
CD46-216ENST00000490278 NLRC5Q86WI3 1866 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 RAB19A4D1S5 217 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 H3BP45 60 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 J3QRE1 110 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 SPOPO43791 374 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 CGB3P0DN86 165 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 CGB7P0DN87 165 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 CRABP2P29373 138 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 VSNL1P62760 191 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 DHRS2Q13268 280 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 GOLGA7BQ2TAP0 167 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 TMPPEQ6ZT21 453 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 LYZL2Q7Z4W2 148 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 ST13P4Q8IZP2 240 aaPredicted RBP1.72□□□□□ -2.13
CD46-216ENST00000490278 LRRC20Q8TCA0 184 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 OR5P3Q8WZ94 311 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 LRRC39Q96DD0 335 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 ZMYND19Q96E35 227 aaPredicted RBP1.72□□□□□ -2.13
CD46-216ENST00000490278 LINC01587Q99440 93 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 PITX2Q99697 317 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 APOL4Q9BPW4 351 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 HIGD2AQ9BW72 106 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 RAB1BQ9H0U4 201 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 CLEC2DQ9UHP7 191 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 NAGKQ9UJ70 344 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 FADS3Q9Y5Q0 445 aa1.72□□□□□ -2.13
CD46-216ENST00000490278 TRAV8-3A0A0A6YYJ7 113 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 M0QXV9 152 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 PSMD11O00231 422 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 CDS2O95674 445 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 PDYNP01213 254 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 SLC2A1P11166 492 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 RAB25P57735 213 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 BAXQ07812 192 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 BCL2A1Q16548 175 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 C18orf21Q32NC0 220 aaPredicted RBP1.71□□□□□ -2.14
CD46-216ENST00000490278 NXNL2Q5VZ03 156 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 HBMQ6B0K9 141 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 CYHR1Q6ZMK1 362 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 SSX6Q7RTT6 188 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 TCF24Q7RTU0 167 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 MARCH3Q86UD3 253 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 LYPD6Q86Y78 171 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 RBM45Q8IUH3 476 aaKnown RBP1.71□□□□□ -2.14
CD46-216ENST00000490278 OR4K17Q8NGC6 315 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 CASTOR1Q8WTX7 329 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 MSANTD3Q96H12 275 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 TMBIM4Q9HC24 238 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 MMACHCQ9Y4U1 282 aa1.71□□□□□ -2.14
CD46-216ENST00000490278 POLR3AO14802 1390 aaPredicted RBP1.71□□□□□ -2.14
CD46-216ENST00000490278 PLXNB1O43157 2135 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 IGHV1-45A0A0A0MS14 117 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 A0A1B0GU33 70 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 IGKV5-2P06315 115 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 GABRA1P14867 456 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 GTF2H1P32780 548 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 RPA3P35244 121 aaPredicted RBP1.7□□□□□ -2.14
CD46-216ENST00000490278 TSPAN5P62079 268 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 TNNC1P63316 161 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 HBG1P69891 147 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 HBG2P69892 147 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 CASP8Q14790 479 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 TRAM1Q15629 374 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 C10orf107Q8IVU9 208 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 Q8NAQ8 132 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 PHOSPHO2Q8TCD6 241 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 ZNF75CPQ92670 426 aaPredicted RBP1.7□□□□□ -2.14
CD46-216ENST00000490278 MAL2Q969L2 176 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 SUCNR1Q9BXA5 334 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 PRRG3Q9BZD7 231 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 U3KQK5 164 aa1.7□□□□□ -2.14
CD46-216ENST00000490278 IGKV1D-37A0A075B6S9 117 aa1.69□□□□□ -2.14
CD46-216ENST00000490278 A0A1W2PNM2 257 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms