RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 IGHV3-35A0A0C4DH35 117 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CIB4A0PJX0 185 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 EPOPA6NHQ4 379 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 BTNL10A8MVZ5 291 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 A8MXK9 166 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 EPM2AB3EWF7 344 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SYNGR1O43759 233 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF780AO75290 641 aaPredicted RBP2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SPAG7O75391 227 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 RP2O75695 350 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TTC4O95801 387 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 REG1AP05451 166 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 BCHEP06276 602 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 GKN3PP0CG01 181 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TGFBR2P37173 567 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TCL1AP56279 114 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TMEM33P57088 247 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 RPS23P62266 143 aaKnown RBP2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 DEFB103AP81534 67 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 MRPS25P82663 173 aaKnown RBP2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SMAGPQ0VAQ4 97 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PPP1R1AQ13522 171 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 FAM53BQ14153 422 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CCNJQ5T5M9 372 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 HHATQ5VTY9 493 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SPINK14Q6IE38 97 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 FAAP20Q6NZ36 180 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PLET1Q6UQ28 207 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 IGFL2Q6UWQ7 119 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TRAPPC5Q8IUR0 188 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 C10orf107Q8IVU9 208 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CBR4Q8N4T8 237 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 ENKURQ8TC29 256 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 AP3S1Q92572 193 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 FAM3DQ96BQ1 224 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PPCDCQ96CD2 204 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TM4SF18Q96CE8 201 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 MAGEB18Q96M61 343 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SYT15Q9BQS2 421 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 MAP1LC3AQ9H492 121 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 POMKQ9H5K3 350 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 FGFR1OP2Q9NVK5 253 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 ANXA10Q9UJ72 324 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC25A15Q9Y619 301 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 KCNE3Q9Y6H6 103 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 BRWD1Q9NSI6 2320 aa2.34□□□□□ -2.03
DEPDC1-204ENST00000489862 TTC28Q96AY4 2481 aa2.34□□□□□ -2.03
DEPDC1-204ENST00000489862 LOXHD1Q8IVV2 1947 aa2.34□□□□□ -2.03
DEPDC1-204ENST00000489862 NRCAMQ92823 1304 aa2.34□□□□□ -2.03
DEPDC1-204ENST00000489862 TCHHQ07283 1943 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 CENPVL3A0A0U1RRI6 287 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 A0A1B0GXF2 115 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 RBFOX3A6NFN3 312 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 METTL15A6NJ78 407 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 SYCE1LA8MT33 242 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 SHISA9B4DS77 424 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 H0Y9J4 135 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 H3BQV1 296 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 SOCS3O14543 225 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 PFDN6O15212 129 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 ENTPD6O75354 484 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 SERPINA1P01009 418 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 SEMG1P04279 462 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 IFNA16P05015 189 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 IL6P05231 212 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 HPNP05981 417 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 ME2P23368 584 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 HTR1DP28221 377 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 PRSS3P35030 304 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 PFN3P60673 137 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM3AP98173 230 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 BAXQ07812 192 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 GUCA2BQ16661 112 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 LRRC75BQ2VPJ9 315 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 OR2B11Q5JQS5 317 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM236Q5W0B7 351 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM19A5Q7Z5A7 132 aaPredicted RBP2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 DEFB128Q7Z7B8 93 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 UBALD2Q8IYN6 164 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM71E2Q8N5Q1 922 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 CHST4Q8NCG5 386 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 LINC00301Q8NCQ3 95 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 CCDC54Q8NEL0 328 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 OR4K17Q8NGC6 315 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 OR6Q1Q8NGQ2 317 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 OR6N1Q8NGY5 312 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 TEX47Q8TBZ9 253 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 ACTRT1Q8TDG2 376 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 GTSF1Q8WW33 167 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 SRSF12Q8WXF0 261 aaKnown RBP2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 C22orf15Q8WYQ4 148 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 PPWD1Q96BP3 646 aaKnown RBP2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 RBP7Q96R05 134 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 OR52B2Q96RD2 323 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 STACQ99469 402 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 HIST1H4GQ99525 98 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 APOL4Q9BPW4 351 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 LXNQ9BS40 222 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 FGFBP2Q9BYJ0 223 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms