RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 POLR3KQ9Y2Y1 108 aaPredicted RBP6.84□□□□□ -1.31
SF1-218ENST00000489544 INSIG2Q9Y5U4 225 aa6.84□□□□□ -1.31
SF1-218ENST00000489544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.83□□□□□ -1.325e-8■■■■□ 20.6
SF1-218ENST00000489544 IGHV3OR16-10A0A075B7F0 116 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 TRAV39A0A0B4J263 110 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 PPIAL4CA0A0B4J2A2 164 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 A0A0G2JMP0 313 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 A0A0X1KG70 313 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 KIR2DS1A0A191URI9 304 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 NOTOA8MTQ0 251 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 AIPO00170 330 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 LDLRAD4O15165 306 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 ZNF780AO75290 641 aaPredicted RBP6.83□□□□□ -1.32
SF1-218ENST00000489544 GABARAPO95166 117 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 PAHP00439 452 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 PPIAL4GP0DN37 164 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 SNRPBP14678 240 aaKnown RBP6.83□□□□□ -1.32
SF1-218ENST00000489544 ARSBP15848 533 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 CCL3L1P16619 93 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 CPT2P23786 658 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 LMO1P25800 156 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 RPL5P46777 297 aaKnown RBP6.83□□□□□ -1.32
SF1-218ENST00000489544 GLIPR1P48060 266 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 SERPINB10P48595 397 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 BMXP51813 675 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 PAX8Q06710 450 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 GPR176Q14439 515 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 ZNF273Q14593 569 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 CTF1Q16619 201 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 PAN3Q58A45 887 aaKnown RBP6.83□□□□□ -1.32
SF1-218ENST00000489544 NHLRC3Q5JS37 347 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 FAM120AOSQ5T036 256 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 TMEM200BQ69YZ2 307 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 GDPGP1Q6ZNW5 385 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 GDPD3Q7L5L3 318 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 TCF23Q7RTU1 214 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 CLVS1Q8IUQ0 354 aaPredicted RBP6.83□□□□□ -1.32
SF1-218ENST00000489544 OR8H2Q8N162 312 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 SUMF2Q8NBJ7 301 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 LY6G5BQ8NDX9 201 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 OR4M2Q8NGB6 313 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 NDNFQ8TB73 568 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 PLPPR1Q8TBJ4 325 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 DYRK2Q92630 601 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 COQ2Q96H96 371 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 Q96M66 194 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 LPAR5Q9H1C0 372 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 C7orf69Q9H7B7 122 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 LIN7BQ9HAP6 207 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 RHOFQ9HBH0 211 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 ONECUT1Q9UBC0 465 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 GHRLQ9UBU3 117 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 SCOCQ9UIL1 159 aa6.83□□□□□ -1.32
SF1-218ENST00000489544 SONP18583 2426 aaKnown RBP6.83□□□□□ -1.32
SF1-218ENST00000489544 A0A1W2PQ09 198 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 SOCS1O15524 211 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 ENSAO43768 121 aaKnown RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 ECDO95905 644 aaPredicted RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 UBBP0CG47 229 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 PSMD7P51665 324 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 RPL31P62899 125 aaKnown RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 RPS27AP62979 156 aaKnown RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 MOGAT2Q3SYC2 334 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 NKAPLQ5M9Q1 402 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 IDNKQ5T6J7 187 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 CD276Q5ZPR3 534 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 BTNL3Q6UXE8 466 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 C6orf201Q7Z4U5 140 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 TPRA1Q86W33 373 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 PDZD9Q8IXQ8 264 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 OR5H6Q8NGV6 325 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 KCNG3Q8TAE7 436 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 LGALS14Q8TCE9 139 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 PCGF1Q9BSM1 259 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 DPCDQ9BVM2 203 aaPredicted RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 TMEM59Q9BXS4 323 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 BARHL1Q9BZE3 327 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 FAM234AQ9H0X4 552 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 CST11Q9H112 138 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 SEBOXQ9HB31 216 aaPredicted RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 SIRT7Q9NRC8 400 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 PEX16Q9Y5Y5 336 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 SOX21Q9Y651 276 aaPredicted RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 AUP1Q9Y679 476 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 FN1P02751 2386 aaKnown RBP6.82□□□□□ -1.32
SF1-218ENST00000489544 MTORP42345 2549 aa6.82□□□□□ -1.32
SF1-218ENST00000489544 WNK2Q9Y3S1 2297 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 UBE2QL1A1L167 161 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 MGST3O14880 152 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 GPR37O15354 613 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 MMP23AO75900 390 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 IL1AP01583 271 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 LIPFP07098 398 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 MMP9P14780 707 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 CFPP27918 469 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 BLVRBP30043 206 aaPredicted RBP6.81□□□□□ -1.32
SF1-218ENST00000489544 VEGFCP49767 419 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 P2RX3P56373 397 aa6.81□□□□□ -1.32
SF1-218ENST00000489544 TMEM50BP56557 158 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms