RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 LINC00312Q9Y6C7 94 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 MAGEA13PA6NCF6 341 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 DNAJC9-AS1A6NH13 148 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 SLC33A1O00400 549 aaPredicted RBP14.19□□□□□ -0.14
MDC1-206ENST00000489540 RBP4P02753 201 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 CSN2P05814 226 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 CCL3L1P16619 93 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 CPEP16870 476 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 PSMA1P25786 263 aaKnown RBP14.19□□□□□ -0.14
MDC1-206ENST00000489540 MAP2K4P45985 399 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 DLX6P56179 175 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 ERVFRD-1P60508 538 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 GABARAPL2P60520 117 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 PRB3Q04118 309 aaPredicted RBP14.19□□□□□ -0.14
MDC1-206ENST00000489540 SLC9A3R2Q15599 337 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 TBCEQ15813 527 aaPredicted RBP14.19□□□□□ -0.14
MDC1-206ENST00000489540 NHLRC3Q5JS37 347 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 OSR2Q8N2R0 312 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.19□□□□□ -0.14
MDC1-206ENST00000489540 OR10K1Q8NGX5 313 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 PHYHIPQ92561 330 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 NKX3-1Q99801 234 aaPredicted RBP14.19□□□□□ -0.14
MDC1-206ENST00000489540 UQCC2Q9BRT2 126 aa14.19□□□□□ -0.14
MDC1-206ENST00000489540 A0A0U1RQK1 487 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 MDFIC2A0A1B0GVS7 189 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 SC5DO75845 299 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 GTF2F2P13984 249 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 DLX1P56177 255 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 KLRD1Q13241 179 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 INSL4Q14641 139 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 MIDNQ504T8 468 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 HCP5Q6MZN7 132 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 ZNF367Q7RTV3 350 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 TMEM86BQ8N661 226 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 MUL1Q969V5 352 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 FOXRED1Q96CU9 486 aaPredicted RBP14.18□□□□□ -0.14
MDC1-206ENST00000489540 C1orf147Q96MC9 270 aaPredicted RBP14.18□□□□□ -0.14
MDC1-206ENST00000489540 ZNF714Q96N38 554 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 PPA2Q9H2U2 334 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 ST3GAL6Q9Y274 331 aa14.18□□□□□ -0.14
MDC1-206ENST00000489540 MRPS28Q9Y2Q9 187 aaKnown RBP14.18□□□□□ -0.14
MDC1-206ENST00000489540 UBE2J1Q9Y385 318 aaPredicted RBP14.18□□□□□ -0.14
MDC1-206ENST00000489540 A0A1W2PRD5 423 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 A0A1W2PRF3 423 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 A0A1W2PRM7 423 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 HOXA3O43365 443 aaPredicted RBP14.17□□□□□ -0.14
MDC1-206ENST00000489540 RNASE1P07998 156 aaKnown RBP14.17□□□□□ -0.14
MDC1-206ENST00000489540 FBP1P09467 338 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 SRMP19623 302 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 AESQ08117 197 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 PIGYQ3MUY2 71 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 SLC22A6Q4U2R8 563 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 HSD17B12Q53GQ0 312 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 GLIPR1L1Q6UWM5 242 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 LINC00596Q86U02 117 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 LYPD6Q86Y78 171 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 TPRX1Q8N7U7 411 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 SSMEM1Q8WWF3 244 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 TMEM203Q969S6 136 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 MRPS24Q96EL2 167 aaKnown RBP14.17□□□□□ -0.14
MDC1-206ENST00000489540 DUX5Q96PT3 197 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 ACOT13Q9NPJ3 140 aa14.17□□□□□ -0.14
MDC1-206ENST00000489540 TRGV10A0A0A0MS01 117 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 TRAV24A0A0B4J272 114 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 MEIOCA2RUB1 952 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 MELTFP08582 738 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 UCHL1P09936 223 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 SERPINA2P20848 420 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 KCNJ3P48549 501 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 GP2P55259 537 aaKnown RBP14.16□□□□□ -0.14
MDC1-206ENST00000489540 RBM11P57052 281 aaKnown RBP14.16□□□□□ -0.14
MDC1-206ENST00000489540 ACTG1P63261 375 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 PAN3Q58A45 887 aaKnown RBP14.16□□□□□ -0.14
MDC1-206ENST00000489540 KRBOX4Q5JUW0 171 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 FAM27D1Q5T7N8 215 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 GLT8D1Q68CQ7 371 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 C16orf87Q6PH81 154 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 LDLRAD3Q86YD5 345 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 SVOPQ8N4V2 548 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 OR13D1Q8NGV5 346 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 CORO2AQ92828 525 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 GCDHQ92947 438 aaPredicted RBP14.16□□□□□ -0.14
MDC1-206ENST00000489540 BARHL1Q9BZE3 327 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 SLITRK2Q9H156 845 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 NCOR1P1Q9H4R4 102 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 IFT22Q9H7X7 185 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 GHRLQ9UBU3 117 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 LRRC42Q9Y546 428 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 POMT1Q9Y6A1 747 aa14.16□□□□□ -0.14
MDC1-206ENST00000489540 PAHP00439 452 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 IGHV1-8P0DP01 117 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 SAA4P35542 130 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 GLIPR1P48060 266 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 EMX1Q04741 257 aaPredicted RBP14.15□□□□□ -0.14
MDC1-206ENST00000489540 AWAT2Q6E213 333 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 TCF23Q7RTU1 214 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 TRAPPC6BQ86SZ2 158 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 LRRTM1Q86UE6 522 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 GAL3ST2Q9H3Q3 398 aa14.15□□□□□ -0.14
MDC1-206ENST00000489540 TAS2R3Q9NYW6 316 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms