RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CST4P01036 141 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 HLA-DPB1P04440 258 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 OCM2P0CE71 109 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 OCMP0CE72 109 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 COL8A2P25067 703 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 GABRA5P31644 462 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 S100A5P33763 92 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 CD200P41217 278 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 GPR6P46095 362 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 TGM4P49221 684 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 PRDX4Q13162 271 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 ZNF404Q494X3 552 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 CCDC58Q4VC31 144 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 WDR38Q5JTN6 314 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR2G6Q5TZ20 316 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 LIPKQ5VXJ0 399 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 C1orf87Q8N0U7 546 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 MCFD2Q8NI22 146 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 C10orf105Q8TEF2 133 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 RAB1CQ92928 201 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 LYZL4Q96KX0 146 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 RTL8AQ9BWD3 113 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 FN3KRPQ9HA64 309 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 NEK6Q9HC98 313 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 HHLA2Q9UM44 414 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 PEX16Q9Y5Y5 336 aa6.72□□□□□ -1.33
TRAPPC12-221ENST00000489032 IGHV4-30-2A0A087WSY4 118 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 IGLV5-39A0A0G2JS06 123 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 TRBV2A0A0J9YWF9 115 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 PNMA8CA0A1B0GUJ8 204 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 LOC107986453A0A1B0GWG9 222 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 A0A1B0GWJ7 208 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 TRDV1A0A1B0GX56 115 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 A0A1W2PPH5 198 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 TMEM210A6NLX4 147 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF850A8MQ14 1090 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 LYNX1G3V0Z9 82 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 HSPB6O14558 160 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 GPX5O75715 221 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 GATBO75879 557 aaKnown RBP6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 IGLV3-1P01715 115 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 LYNX1P0DP58 116 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 CCL1P22362 96 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 USF1P22415 310 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 GIFP27352 417 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 FGF9P31371 208 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 NR4A2P43354 598 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 RORCP51449 518 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 BMXP51813 675 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 CLVS2Q5SYC1 327 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 PLCXD3Q63HM9 321 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 RPL22L1Q6P5R6 122 aaKnown RBP6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 C16orf87Q6PH81 154 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 C12orf54Q6X4T0 127 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 DNM1P46Q6ZS02 220 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 MOB3CQ70IA8 216 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 PRSS35Q8N3Z0 413 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF485Q8NCK3 441 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR6Q1Q8NGQ2 317 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR5AK2Q8NH90 309 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 SGMS2Q8NHU3 365 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 YIPF5Q969M3 257 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 SLC25A28Q96A46 364 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 C10orf35Q96D05 121 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 RNF170Q96K19 258 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 KCTD7Q96MP8 289 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 TECTBQ96PL2 329 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 CENPOQ9BU64 300 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 SLIRPQ9GZT3 109 aaKnown RBP6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 ISG20L2Q9H9L3 353 aaKnown RBP6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF275Q9NSD4 429 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 TMEM106BQ9NUM4 274 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 TREM2Q9NZC2 230 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 SLC7A11Q9UPY5 501 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 RHBDD3Q9Y3P4 386 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 V9GYS6 101 aa6.71□□□□□ -1.34
TRAPPC12-221ENST00000489032 A0A075B6Q4 140 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 A0A1B0GTI1 187 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 hCG_1807616A0A1W2PRN6 198 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 ISPDA4D126 451 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR5B21A6NL26 309 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 H3BSH0 61 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 RP2O75695 350 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 NRASP01111 189 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 ISG15P05161 165 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 CD2P06729 351 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 CELP19835 753 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 ANOS1P23352 680 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 ACKR3P25106 362 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 KIR3DL2P43630 455 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 GNG3P63215 75 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 LOXL1Q08397 574 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 KCNJ8Q15842 424 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF181Q2M3W8 571 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 CD200R1LQ6Q8B3 271 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 MS4A15Q8N5U1 240 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR5A2Q8NGI9 324 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR13C3Q8NGS6 347 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 TSEN15Q8WW01 171 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms