RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 COL10A1Q03692 680 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 SCN1BQ07699 218 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 RBM39Q14498 530 aaKnown RBP13.37□□□□□ -0.27
CLDN11-208ENST00000488989 TMEM155Q4W5P6 130 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 NKAPLQ5M9Q1 402 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 OLFML2AQ68BL7 652 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 C17orf107Q6ZR85 190 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 SNX29P2Q8IUI4 249 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 MUC20Q8N307 709 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-208ENST00000488989 ZNF561Q8N587 486 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 DEFB108BQ8NET1 73 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 GPX8Q8TED1 209 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 SMIM4Q8WVI0 70 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 RAB1CQ92928 201 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 MBD6Q96DN6 1003 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 SNX22Q96L94 193 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 GAFA1Q96PS6 74 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 TMEM246Q9BRR3 403 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 FAAP24Q9BTP7 215 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 DPCDQ9BVM2 203 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-208ENST00000488989 SHARPINQ9H0F6 387 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 ZNF665Q9H7R5 613 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 BEX4Q9NWD9 120 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-208ENST00000488989 ELF5Q9UKW6 265 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-208ENST00000488989 MAB21L2Q9Y586 359 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 APCP25054 2843 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 CSN2P05814 226 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 CSF3P09919 207 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 PTHLHP12272 177 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 PRSS3P35030 304 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 GABRA2P47869 451 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 PDLIM4P50479 330 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 ATP5J2P56134 94 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 PYDC2Q56P42 97 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 PAN3Q58A45 887 aaKnown RBP13.36□□□□□ -0.27
CLDN11-208ENST00000488989 DCDC5Q6ZRR9 648 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 GAPTQ8N292 157 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 NINJ1Q92982 152 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 CCDC32Q9BV29 185 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 FAM234AQ9H0X4 552 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 AK3Q9UIJ7 227 aa13.36□□□□□ -0.27
CLDN11-208ENST00000488989 ANKRD17O75179 2603 aaKnown RBP13.36□□□□□ -0.27
CLDN11-208ENST00000488989 ABCA12Q86UK0 2595 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 MEIOCA2RUB1 952 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 K7N7A8 449 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 PPIHO43447 177 aaKnown RBP13.35□□□□□ -0.27
CLDN11-208ENST00000488989 SSX4O60224 188 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 SSX5O60225 188 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 TFF1P04155 84 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 GPR6P46095 362 aaPredicted RBP13.35□□□□□ -0.27
CLDN11-208ENST00000488989 OR3A1P47881 315 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 KIAA2026Q5HYC2 2103 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 BRICD5Q6PL45 260 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 LRRC75A-AS1Q8N1F1 130 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 Q8N402 240 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 ZNF525Q8N782 197 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 OR4S1Q8NGB4 309 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 OR52I2Q8NH67 350 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 PPP1R35Q8TAP8 253 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 GCDHQ92947 438 aaPredicted RBP13.35□□□□□ -0.27
CLDN11-208ENST00000488989 MED30Q96HR3 178 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 CCL13Q99616 98 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 ANAPC10Q9UM13 185 aa13.35□□□□□ -0.27
CLDN11-208ENST00000488989 RBMX2Q9Y388 322 aaKnown RBP13.35□□□□□ -0.27
CLDN11-208ENST00000488989 TRBV6-6A0A0A6YYG2 114 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 UBE2QL1A1L167 161 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 POM121CA8CG34 1229 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 J3QRK9 145 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 NDUFS8O00217 210 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 NAPSAO96009 420 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 TK1P04183 234 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 LPLP06858 475 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 DTYMKP23919 212 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 DNASE1P24855 282 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 GNG2P59768 71 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 IL13RA1P78552 427 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 DGCR2P98153 550 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 GUCA2AQ02747 115 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 SSBP1Q04837 148 aaKnown RBP13.34□□□□□ -0.27
CLDN11-208ENST00000488989 SLC36A1Q7Z2H8 476 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 OR8H2Q8N162 312 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 BPIFB2Q8N4F0 458 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 PLPPR1Q8TBJ4 325 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 NUDCD2Q8WVJ2 157 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 TRIM63Q969Q1 353 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 CMSS1Q9BQ75 279 aaKnown RBP13.34□□□□□ -0.27
CLDN11-208ENST00000488989 OCSTAMPQ9BR26 566 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 PPA2Q9H2U2 334 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 RIMS4Q9H426 269 aaPredicted RBP13.34□□□□□ -0.27
CLDN11-208ENST00000488989 NCOR1P1Q9H4R4 102 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 MTFP1Q9UDX5 166 aa13.34□□□□□ -0.27
CLDN11-208ENST00000488989 A0A1B0GW55 424 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 CEACAM18A8MTB9 384 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 MGST3O14880 152 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 CD3GP09693 182 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DUX4L2P0CJ85 424 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DUX4L3P0CJ86 424 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DUX4L4P0CJ87 422 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms