RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SH2D7A6NKC9 451 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-231ENST00000488905 BUB1B-PAK6H3BSN5 160 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 K7EIL1 84 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 TOR1AO14656 332 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 AMY1AP04745 511 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 AMY2AP04746 511 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 KPNB1Q14974 876 aaKnown RBP14.67□□□□□ -0.06
HDAC6-231ENST00000488905 FDX2Q6P4F2 183 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 C10orf99Q6UWK7 81 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 RNF144BQ7Z419 303 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 CHST4Q8NCG5 386 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 OR4D6Q8NGJ1 314 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 OR51A4Q8NGJ6 313 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 OR13C3Q8NGS6 347 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 OR13C9Q8NGT0 318 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 OR10AC1Q8NH08 325 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 COQ2Q96H96 371 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 RHOFQ9HBH0 211 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 NEK6Q9HC98 313 aa14.67□□□□□ -0.06
HDAC6-231ENST00000488905 A0A087X0M5 115 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 A0A1B0GX30 115 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 M0QZK8 103 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 SLC33A1O00400 549 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-231ENST00000488905 SLC16A6O15403 523 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 DUS4LO95620 317 aaKnown RBP14.66□□□□□ -0.06
HDAC6-231ENST00000488905 CLIC3O95833 236 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 MT-ND2P03891 347 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 HTR1AP08908 422 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 RBM39Q14498 530 aaKnown RBP14.66□□□□□ -0.06
HDAC6-231ENST00000488905 ATXN7L3Q14CW9 347 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-231ENST00000488905 KRBOX4Q5JUW0 171 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 C1orf146Q5VVC0 180 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 CCDC144NLQ6NUI1 221 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 Q6P435 159 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 KCTD20Q7Z5Y7 419 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 SAXO1Q8IYX7 474 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 IMPAD1Q9NX62 359 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 ING3Q9NXR8 418 aa14.66□□□□□ -0.06
HDAC6-231ENST00000488905 DAPL1A0PJW8 107 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 ZNF729A6NN14 1252 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-231ENST00000488905 OOSP1A8MZH6 123 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 LY6LH3BQJ8 138 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 J3QRE1 110 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 MNDAP41218 407 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 OR3A4PP47883 348 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 CCR9P51686 369 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 SCN1BQ07699 218 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 OSR2Q8N2R0 312 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 RNFT2Q96EX2 444 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 CENPNQ96H22 339 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-231ENST00000488905 OSBPL10Q9BXB5 764 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 PPIL3Q9H2H8 161 aaKnown RBP14.65□□□□□ -0.06
HDAC6-231ENST00000488905 INPP5EQ9NRR6 644 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 MOB4Q9Y3A3 225 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 HSPE1-MOB4S4R3N1 261 aa14.65□□□□□ -0.06
HDAC6-231ENST00000488905 SAC3D1A6NKF1 404 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 PRRX1P54821 245 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 BNIP1Q12981 228 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 C17orf58Q2M2W7 97 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 C9orf152Q5JTZ5 239 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 UTF1Q5T230 341 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 TRUB1Q8WWH5 349 aaKnown RBP14.64□□□□□ -0.07
HDAC6-231ENST00000488905 PELI1Q96FA3 418 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 KIRREL1Q96J84 757 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 OR6C3Q9NZP0 311 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 RYR3Q15413 4870 aa14.64□□□□□ -0.07
HDAC6-231ENST00000488905 OR4C45A6NMZ5 311 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 NFYBP25208 207 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 GLP1RP43220 463 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 KRTAP10-11P60412 298 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 ZP1P60852 638 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 CDK5R1Q15078 307 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 VAX1Q5SQQ9 334 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 LINC00482Q8N8I6 264 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 OR9G1Q8NH87 305 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 TOMM40LQ969M1 308 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 RPEQ96AT9 228 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 C4orf36Q96KX1 117 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 ZCCHC4Q9H5U6 513 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 PCDHB16Q9NRJ7 776 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 MYRFQ9Y2G1 1151 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 AMMECR1Q9Y4X0 333 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-231ENST00000488905 TENM3Q9P273 2699 aa14.63□□□□□ -0.07
HDAC6-231ENST00000488905 KBTBD11-OT1A0A1B0GTJ5 212 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 WI2-2373I1.2A0A1W2PRP0 233 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 PSMB11A5LHX3 300 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 J3QLW9 94 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 HSPB6O14558 160 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 DEGS1O15121 323 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 HCKP08631 526 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 FAM106CPP0CH98 169 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 ZNF19P17023 458 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 EGFEM1PQ0D2K5 195 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 ALKBH1Q13686 389 aaKnown RBP14.62□□□□□ -0.07
HDAC6-231ENST00000488905 SLC25A30Q5SVS4 291 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 ETV3LQ6ZN32 361 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 ACBD7Q8N6N7 88 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 OR51T1Q8NGJ9 327 aa14.62□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A18PA6NE21 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A16PA6NEW6 464 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms