RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SLC22A6Q4U2R8 563 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 HCP5Q6MZN7 132 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 USP43Q70EL4 1123 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 GDPD3Q7L5L3 318 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 CMTM4Q8IZR5 234 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 OR4M1Q8NGD0 313 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 PPP1R35Q8TAP8 253 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 SLC25A28Q96A46 364 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 COQ2Q96H96 371 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 Q96M66 194 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 PPA2Q9H2U2 334 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 RCC2Q9P258 522 aaKnown RBP15.29■□□□□ 0.04
PTCD3-217ENST00000488801 GHRLQ9UBU3 117 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 TRAV1-2A0A0B4J238 106 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 C17orf98A8MV24 154 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 RNASEK-C17orf49H0YIS7 233 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 GEMIN2O14893 280 aaKnown RBP15.28■□□□□ 0.04
PTCD3-217ENST00000488801 RBP4P02753 201 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 CSTBP04080 98 aaKnown RBP15.28■□□□□ 0.04
PTCD3-217ENST00000488801 UBBP0CG47 229 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 GTF2F2P13984 249 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 PRTN3P24158 256 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 P2RX3P56373 397 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 BPIFB3P59826 476 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 QRFPP83859 136 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 TMEM104Q8NE00 496 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 TSPAN14Q8NG11 270 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 OR6M1Q8NGM8 313 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 S100A13Q99584 98 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 SLC6A7Q99884 636 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 SLITRK2Q9H156 845 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 PRDM13Q9H4Q3 707 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 NCOR1P1Q9H4R4 102 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 METTL8Q9H825 291 aaKnown RBP15.28■□□□□ 0.04
PTCD3-217ENST00000488801 PCDHB16Q9NRJ7 776 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 STUB1Q9UNE7 303 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 LINC00312Q9Y6C7 94 aa15.28■□□□□ 0.04
PTCD3-217ENST00000488801 A0A087WXM4 84 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A10PA6NDY2 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A18PA6NE21 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A16PA6NEW6 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A20PA6NIJ5 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A8PA6NJQ4 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A7PA6NKC0 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A22PA8MWA6 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A12PA8MX19 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A5PA8MXJ8 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A23PA8MXZ1 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 SLC17A2O00624 439 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 DEGS1O15121 323 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A15PP0C7V4 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A13PP0C7W8 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A14PP0C7W9 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 FAM90A24PP0C7X0 464 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 MGMTP16455 207 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 CCL3L1P16619 93 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 EDDM3BP56851 147 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 NEDD8Q15843 81 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 GPR157Q5UAW9 335 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 BCL6BQ8N143 479 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-217ENST00000488801 TPRX1Q8N7U7 411 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-217ENST00000488801 NR1H4Q96RI1 486 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-217ENST00000488801 SIRT7Q9NRC8 400 aa15.27■□□□□ 0.04
PTCD3-217ENST00000488801 IGHV3OR16-10A0A075B7F0 116 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 A0A0A6YYJ9 748 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 IGHV1-69DA0A0B4J2H0 117 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 IGHV1-69P01742 117 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 VSIG8P0DPA2 414 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 JUNBP17275 347 aaPredicted RBP15.26■□□□□ 0.03
PTCD3-217ENST00000488801 HTR2CP28335 458 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 KCNJ3P48549 501 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 DLX1P56177 255 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 HILS1P60008 231 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 UNC119Q13432 240 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 EDDM3AQ14507 147 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 RSBN1Q5VWQ0 802 aaPredicted RBP15.26■□□□□ 0.03
PTCD3-217ENST00000488801 RUSC1-AS1Q66K80 236 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 BRD3OSQ6XYD6 125 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 CORO2AQ92828 525 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 LHX4Q969G2 390 aa15.26■□□□□ 0.03
PTCD3-217ENST00000488801 TXNL4BQ9NX01 149 aaKnown RBP15.26■□□□□ 0.03
PTCD3-217ENST00000488801 AK6Q9Y3D8 172 aaKnown RBP15.26■□□□□ 0.03
PTCD3-217ENST00000488801 A0A1W2PPH5 198 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 TMEM14DPA8MWL7 114 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 BPNT1O95861 308 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 ZNF728P0DKX0 622 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 SMIM18P0DKX4 95 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 AESQ08117 197 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 KLRD1Q13241 179 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 ATXN7L3Q14CW9 347 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-217ENST00000488801 PAN3Q58A45 887 aaKnown RBP15.25■□□□□ 0.03
PTCD3-217ENST00000488801 NCR3LG1Q68D85 454 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 SIGIRRQ6IA17 410 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 C22orf42Q6IC83 251 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 NR2C2APQ86WQ0 139 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 SUMF2Q8NBJ7 301 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 PLPPR1Q8TBJ4 325 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 C22orf15Q8WYQ4 148 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms