RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 FAM90A10PA6NDY2 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A18PA6NE21 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A16PA6NEW6 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A20PA6NIJ5 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A8PA6NJQ4 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A7PA6NKC0 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A22PA8MWA6 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A12PA8MX19 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A5PA8MXJ8 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A23PA8MXZ1 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM157AC9JC47 383 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 MCRIP1C9JLW8 97 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 K7N7A8 449 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 PHF1O43189 567 aaPredicted RBP8.55□□□□□ -1.04
SKA1-204ENST00000488454 MSMBP08118 114 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A15PP0C7V4 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A13PP0C7W8 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A14PP0C7W9 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FAM90A24PP0C7X0 464 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 RAB6AP20340 208 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 LMO1P25800 156 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 SCAND1P57086 179 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 SEC61A1P61619 476 aaKnown RBP8.55□□□□□ -1.04
SKA1-204ENST00000488454 RPS27AP62979 156 aaKnown RBP8.55□□□□□ -1.04
SKA1-204ENST00000488454 QRFPP83859 136 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 GRK1Q15835 563 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 PAN3Q58A45 887 aaKnown RBP8.55□□□□□ -1.04
SKA1-204ENST00000488454 Q6P435 159 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 MZT2AQ6P582 158 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 ZNF841Q6ZN19 808 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 BTN2A1Q7KYR7 527 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 GDPD3Q7L5L3 318 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 NDNFQ8TB73 568 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 ACOT12Q8WYK0 555 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 H1FXQ92522 213 aaKnown RBP8.55□□□□□ -1.04
SKA1-204ENST00000488454 AP3S1Q92572 193 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 PTX4Q96A99 478 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 PHF21AQ96BD5 680 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 C1orf147Q96MC9 270 aaPredicted RBP8.55□□□□□ -1.04
SKA1-204ENST00000488454 NEDD4LQ96PU5 975 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 BARHL1Q9BZE3 327 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 FBLN5Q9UBX5 448 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 RSL24D1Q9UHA3 163 aaKnown RBP8.55□□□□□ -1.04
SKA1-204ENST00000488454 PEX16Q9Y5Y5 336 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 ETV7Q9Y603 341 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 TANC2Q9HCD6 1990 aa8.55□□□□□ -1.04
SKA1-204ENST00000488454 A0A0B4J203 849 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 TRAV20A0A0B4J274 112 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 A0A1B0GW55 424 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 H3BMQ9 156 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 SLC33A1O00400 549 aaPredicted RBP8.54□□□□□ -1.04
SKA1-204ENST00000488454 HSPB6O14558 160 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 MGST3O14880 152 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 PAHP00439 452 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4L2P0CJ85 424 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4L3P0CJ86 424 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4L4P0CJ87 422 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4L5P0CJ88 424 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4L6P0CJ89 424 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4L7P0CJ90 424 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 IGHV4-31P0DP07 118 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 SELLP14151 372 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 ZNF182P17025 639 aaPredicted RBP8.54□□□□□ -1.04
SKA1-204ENST00000488454 FUT3P21217 361 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 KCNJ3P48549 501 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 EDDM3BP56851 147 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 UNC119Q13432 240 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 RBM39Q14498 530 aaKnown RBP8.54□□□□□ -1.04
SKA1-204ENST00000488454 SPCS2Q15005 226 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4L9Q6RFH8 374 aaPredicted RBP8.54□□□□□ -1.04
SKA1-204ENST00000488454 BTNL3Q6UXE8 466 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 GLCCI1Q86VQ1 547 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 OR8H2Q8N162 312 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 SUMF2Q8NBJ7 301 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 OR56B1Q8NGI3 324 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 NEK7Q8TDX7 302 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DGCR14Q96DF8 476 aaKnown RBP8.54□□□□□ -1.04
SKA1-204ENST00000488454 MSI2Q96DH6 328 aaKnown RBP8.54□□□□□ -1.04
SKA1-204ENST00000488454 C1orf159Q96HA4 380 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 Q96M66 194 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DPCDQ9BVM2 203 aaPredicted RBP8.54□□□□□ -1.04
SKA1-204ENST00000488454 TM2D1Q9BX74 207 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 CHST6Q9GZX3 395 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 ATG5Q9H1Y0 275 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 KCNK15Q9H427 330 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 IFT22Q9H7X7 185 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 CREBBPQ92793 2442 aa8.54□□□□□ -1.04
SKA1-204ENST00000488454 TRBV23-1A0A0A0MS06 115 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 TRAV24A0A0B4J272 114 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 A0A1W2PQ09 198 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 TMEM82A0PJX8 343 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 DPPA5A6NC42 116 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 A8MXK9 166 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 ZNF701M0R085 212 aaPredicted RBP8.53□□□□□ -1.04
SKA1-204ENST00000488454 LDLRAD4O15165 306 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 ENSAO43768 121 aaKnown RBP8.53□□□□□ -1.04
SKA1-204ENST00000488454 PSPNO60542 156 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 PDCD6O75340 191 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms