RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CISHQ9NSE2 258 aa2.29□□□□□ -2.04
ITGB1-214ENST00000488427 ZNHIT6Q9NWK9 470 aaKnown RBP2.29□□□□□ -2.04
ITGB1-214ENST00000488427 KCNE3Q9Y6H6 103 aa2.29□□□□□ -2.04
ITGB1-214ENST00000488427 DNAH10Q8IVF4 4471 aa2.29□□□□□ -2.04
ITGB1-214ENST00000488427 UQCRHLA0A096LP55 91 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 A0A1W2PPE3 182 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 M0QYV0 167 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 PPP1R2P9O14990 202 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 FGGP02679 453 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 CRHP06850 196 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 RNASE2P10153 161 aaKnown RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 CELP19835 753 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 NCF2P19878 526 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 KITLGP21583 273 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 PBLDP30039 288 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 MAS1LP35410 378 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 OPRK1P41145 380 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 CDKN1BP46527 198 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 HNMTP50135 292 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 FABP6P51161 128 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 STC1P52823 247 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 AP1S1P61966 158 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 PPP1R7Q15435 360 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 RGNQ15493 299 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 ZSCAN26Q16670 478 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 HENMT1Q5T8I9 393 aaKnown RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 RWDD4Q6NW29 188 aaKnown RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 UQCC3Q6UW78 93 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 NTM-AS1Q6ZSK4 140 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 SNX20Q7Z614 316 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 COMTD1Q86VU5 262 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 UBE2J2Q8N2K1 259 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 EIF1ADQ8N9N8 165 aaKnown RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 FAM110BQ8TC76 370 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 TBL1YQ9BQ87 522 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 C11orf70Q9BRQ4 267 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 ZNF717Q9BY31 904 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 ROPN1BQ9BZX4 212 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 SAV1Q9H4B6 383 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 XKR8Q9H6D3 395 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 CRCT1Q9UGL9 99 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 BOKQ9UMX3 212 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-214ENST00000488427 HSPG2P98160 4391 aa2.28□□□□□ -2.04
ITGB1-214ENST00000488427 HUWE1Q7Z6Z7 4374 aaKnown RBP2.27□□□□□ -2.05
ITGB1-214ENST00000488427 A0A1B0GW55 424 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 A0A1W2PPV9 198 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 TRAPPC6AO75865 159 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 HLA-DQA1P01909 254 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 CT62P0C5K7 136 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 DUX4L2P0CJ85 424 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 DUX4L3P0CJ86 424 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 DUX4L5P0CJ88 424 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 DUX4L6P0CJ89 424 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 DUX4L7P0CJ90 424 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 GTF2H1P32780 548 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 RFX3P48380 749 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 ACTG2P63267 376 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 DOC2AQ14183 400 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 ZMYND11Q15326 602 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 ANKDD1AQ495B1 522 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 VPS26BQ4G0F5 336 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 PTPN20Q4JDL3 420 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 PHYHD1Q5SRE7 291 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 ARMC12Q5T9G4 340 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 RTL4Q6ZR62 310 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 LRRC25Q8N386 305 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-214ENST00000488427 ZCCHC7Q8N3Z6 543 aaKnown RBP2.27□□□□□ -2.05
ITGB1-214ENST00000488427 HSD17B11Q8NBQ5 300 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 NECAP1Q8NC96 275 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 CSPG4P5Q96PW8 444 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 CRACR2AQ9BSW2 395 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 CHID1Q9BWS9 393 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 UGT2B28Q9BY64 529 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 EDA2RQ9HAV5 297 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 DUX4Q9UBX2 424 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 YARS2Q9Y2Z4 477 aaKnown RBP2.27□□□□□ -2.05
ITGB1-214ENST00000488427 S4R3C0 116 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 MYCBP2O75592 4640 aa2.27□□□□□ -2.05
ITGB1-214ENST00000488427 TRBV11-1A0A0K0K1C0 115 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 DPRXA6NFQ7 191 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 E7EQL1 145 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 MRPS12O15235 138 aaKnown RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 CHST1O43916 411 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 POP7O75817 140 aaKnown RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 ZNF688P0C7X2 276 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 DCKP27707 260 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 SSTR5P35346 364 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 SPINT3P49223 89 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 SULT1E1P49888 294 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 ATP5IP56385 69 aaPredicted RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 OR4D2P58180 307 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 SLC35A2P78381 396 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 EMX1Q04741 257 aaPredicted RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 CDH17Q12864 832 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 GK3PQ14409 553 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 METTL21CQ5VZV1 264 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 ANKRD26P1Q6NSI1 321 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 LINC00336Q6ZUF6 198 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 OR10J6PQ8NGY7 276 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms