RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 PEBP4Q96S96 227 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 TMEM109Q9BVC6 243 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 ARMC7Q9H6L4 198 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 PARVBQ9HBI1 364 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 LZTFL1Q9NQ48 299 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 SNX12Q9UMY4 172 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 MED23Q9ULK4 1368 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 BCL9LQ86UU0 1499 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 NEO1Q92859 1461 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 CD163L1Q9NR16 1453 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 NFAT5O94916 1531 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 ARAP3Q8WWN8 1544 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 UGGT1Q9NYU2 1555 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 CAMSAP1Q5T5Y3 1602 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 CLTCQ00610 1675 aaKnown RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 CENPXA8MT69 81 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 CETN3O15182 167 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 ZNF189O75820 626 aaPredicted RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 GYPCP04921 128 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 OR4Q2P0C623 313 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 HLA-GP17693 338 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 PPP1R2P41236 205 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 PSMD4P55036 377 aaKnown RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 NCALDP61601 193 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 TNNC1P63316 161 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 XIAPP98170 497 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 LIN52Q52LA3 116 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 CCDC122Q5T0U0 273 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 FAM173BQ6P4H8 233 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 C16orf87Q6PH81 154 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 USP50Q70EL3 339 aaPredicted RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 TRMT10CQ7L0Y3 403 aaKnown RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 NELFCDQ8IXH7 590 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 OR4D6Q8NGJ1 314 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 ORAOV1Q8WV07 137 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 C8orf76Q96K31 380 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 PKMYT1Q99640 499 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 NCOR1P1Q9H4R4 102 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 INIPQ9NRY2 104 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 DDX18Q9NVP1 670 aaKnown RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 FAIMQ9NVQ4 179 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 IL20Q9NYY1 176 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 ARL2BPQ9Y2Y0 163 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 AGLP35573 1532 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 ZFYVE16Q7Z3T8 1539 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 DIP2AQ14689 1571 aa2.31□□□□□ -2.04
USP48-209ENST00000487880 MED1Q15648 1581 aaPredicted RBP2.31□□□□□ -2.04
USP48-209ENST00000487880 A0A1W2PRF3 423 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 A0A1W2PRM7 423 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 SIGLEC16A6NMB1 481 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 TEAD1P28347 426 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 GNRHRP30968 328 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ACOT2P49753 483 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 MLF1P58340 268 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 HPCAP84074 193 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 SPA17Q15506 151 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ZCWPW2Q504Y3 356 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 TNFAIP8L3Q5GJ75 292 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 CPTPQ5TA50 214 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 DHRS4L2Q6PKH6 230 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ST13P4Q8IZP2 240 aaPredicted RBP2.3□□□□□ -2.04
USP48-209ENST00000487880 LINC00337Q8N6G1 96 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 OR8K3Q8NH51 312 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ZFAND1Q8TCF1 268 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ITLN2Q8WWU7 325 aaPredicted RBP2.3□□□□□ -2.04
USP48-209ENST00000487880 TFGQ92734 400 aaPredicted RBP2.3□□□□□ -2.04
USP48-209ENST00000487880 DGCR14Q96DF8 476 aaKnown RBP2.3□□□□□ -2.04
USP48-209ENST00000487880 SPACA5Q96QH8 159 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 OR2V2Q96R30 315 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 RGCCQ9H4X1 137 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 VSIRQ9H7M9 311 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 SAR1AQ9NR31 198 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 GUCA1BQ9UMX6 200 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 USH1CQ9Y6N9 552 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ABCB11O95342 1321 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 A0A1W2PP64 1363 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 C1orf167Q5SNV9 1468 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ARHGAP5Q13017 1502 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 TULP4Q9NRJ4 1543 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 ERCC6L2Q5T890 1561 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 KIF1BO60333 1816 aa2.3□□□□□ -2.04
USP48-209ENST00000487880 MROH2AA6NES4 1674 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 MROH1Q8NDA8 1641 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 MRC1P22897 1456 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 MRC2Q9UBG0 1479 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 DISP2A7MBM2 1401 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 A0A1B0GVG6 124 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 UPK1AO00322 258 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 SLC22A1O15245 554 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 NDUFS5O43920 106 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 TRAPPC6AO75865 159 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 DCTN3O75935 186 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 SEC11BP0C7V7 166 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 SRMP19623 302 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 IVDP26440 423 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 CRABP2P29373 138 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 SLC18A1P54219 525 aa2.29□□□□□ -2.04
USP48-209ENST00000487880 ST3GAL4Q11206 333 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms