RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 C11orf42Q8N5U0 333 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 TPRX1Q8N7U7 411 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 NR1H4Q96RI1 486 aaPredicted RBP14.89□□□□□ -0.03
COL1A1-207ENST00000486572 PPA2Q9H2U2 334 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 LINC00312Q9Y6C7 94 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 A0A1W2PRD5 423 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 A0A1W2PRF3 423 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 A0A1W2PRM7 423 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 MEX3AA1L020 520 aaKnown RBP14.88□□□□□ -0.03
COL1A1-207ENST00000486572 C17orf98A8MV24 154 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 HOXA3O43365 443 aaPredicted RBP14.88□□□□□ -0.03
COL1A1-207ENST00000486572 ZNF780AO75290 641 aaPredicted RBP14.88□□□□□ -0.03
COL1A1-207ENST00000486572 SC5DO75845 299 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 RBP4P02753 201 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 CSN2P05814 226 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 ERVFRD-1P60508 538 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 ACTG1P63261 375 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 SLC9A3R2Q15599 337 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 PIGYQ3MUY2 71 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 NHLRC3Q5JS37 347 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 HCP5Q6MZN7 132 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 Q6YL49 198 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 OSR2Q8N2R0 312 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 MUL1Q969V5 352 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 SLC25A28Q96A46 364 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 ZNF714Q96N38 554 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 MGLLQ99685 303 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 HEXA-AS1Q9H8Q6 139 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 TCF7L1Q9HCS4 588 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 PCDHB16Q9NRJ7 776 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 MRPS28Q9Y2Q9 187 aaKnown RBP14.88□□□□□ -0.03
COL1A1-207ENST00000486572 SF3B6Q9Y3B4 125 aaKnown RBP14.88□□□□□ -0.03
COL1A1-207ENST00000486572 FAM96BQ9Y3D0 163 aa14.88□□□□□ -0.03
COL1A1-207ENST00000486572 STAB1Q9NY15 2570 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 FUOMA2VDF0 154 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 MRPS14O60783 128 aaKnown RBP14.87□□□□□ -0.03
COL1A1-207ENST00000486572 RNASE1P07998 156 aaKnown RBP14.87□□□□□ -0.03
COL1A1-207ENST00000486572 CPEP16870 476 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 SERPINA2P20848 420 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 PSMA1P25786 263 aaKnown RBP14.87□□□□□ -0.03
COL1A1-207ENST00000486572 SAA4P35542 130 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 RBM11P57052 281 aaKnown RBP14.87□□□□□ -0.03
COL1A1-207ENST00000486572 TRAM1Q15629 374 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 FAM27D1Q5T7N8 215 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 ZNF367Q7RTV3 350 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 CEACAM19Q7Z692 300 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 PNKDQ8N490 385 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 PHYHIPQ92561 330 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 TMEM203Q969S6 136 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 ST3GAL6Q9Y274 331 aa14.87□□□□□ -0.03
COL1A1-207ENST00000486572 MEIOCA2RUB1 952 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 MEGF11A6BM72 1044 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 MELTFP08582 738 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 FBP1P09467 338 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 GP2P55259 537 aaKnown RBP14.86□□□□□ -0.03
COL1A1-207ENST00000486572 RPS25P62851 125 aaKnown RBP14.86□□□□□ -0.03
COL1A1-207ENST00000486572 AESQ08117 197 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 GPR176Q14439 515 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 ATXN7L3Q14CW9 347 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-207ENST00000486572 SLC22A6Q4U2R8 563 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 MIDNQ504T8 468 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 HSD17B12Q53GQ0 312 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 PAN3Q58A45 887 aaKnown RBP14.86□□□□□ -0.03
COL1A1-207ENST00000486572 AWAT2Q6E213 333 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 ZNF782Q6ZMW2 699 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-207ENST00000486572 TRAPPC6BQ86SZ2 158 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 LINC00596Q86U02 117 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 LYPD6Q86Y78 171 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 LDLRAD3Q86YD5 345 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 UQCC2Q9BRT2 126 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 ACOT13Q9NPJ3 140 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 UBE2J1Q9Y385 318 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-207ENST00000486572 DSCAML1Q8TD84 2053 aa14.86□□□□□ -0.03
COL1A1-207ENST00000486572 TRGV10A0A0A0MS01 117 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 TRAV24A0A0B4J272 114 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 HSPB6O14558 160 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 UCHL1P09936 223 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 IGHV1-8P0DP01 117 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 GTF2F2P13984 249 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 COX7A1P24310 79 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 GLIPR1P48060 266 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 KRBOX4Q5JUW0 171 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 GLIPR1L1Q6UWM5 242 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 SVOPQ8N4V2 548 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 TMEM86BQ8N661 226 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 OR4D6Q8NGJ1 314 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 SSMEM1Q8WWF3 244 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 COQ2Q96H96 371 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 YTHDF1Q9BYJ9 559 aaKnown RBP14.85□□□□□ -0.03
COL1A1-207ENST00000486572 IFT22Q9H7X7 185 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 POMT1Q9Y6A1 747 aa14.85□□□□□ -0.03
COL1A1-207ENST00000486572 A0A1W2PP11 408 aa14.84□□□□□ -0.03
COL1A1-207ENST00000486572 ODAMA1E959 279 aa14.84□□□□□ -0.03
COL1A1-207ENST00000486572 CLPXO76031 633 aa14.84□□□□□ -0.03
COL1A1-207ENST00000486572 OR7C1O76099 320 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-207ENST00000486572 PAHP00439 452 aa14.84□□□□□ -0.03
COL1A1-207ENST00000486572 SRMP19623 302 aa14.84□□□□□ -0.03
COL1A1-207ENST00000486572 GABRA5P31644 462 aa14.84□□□□□ -0.03
COL1A1-207ENST00000486572 EMX1Q04741 257 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-207ENST00000486572 MPV17LQ2QL34 196 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms