RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 RNF122Q9H9V4 155 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 PLEKHA2Q9HB19 425 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 TMEM100Q9NV29 134 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 MYEF2Q9P2K5 600 aaKnown RBP7.78□□□□□ -1.16
COL12A1-208ENST00000486533 B3GAT1Q9P2W7 334 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 ASH2LQ9UBL3 628 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 CARHSP1Q9Y2V2 147 aaKnown RBP7.78□□□□□ -1.16
COL12A1-208ENST00000486533 KCNIP3Q9Y2W7 256 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 TRIM77I1YAP6 450 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 LMX1BO60663 402 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 GOSR1O95249 250 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 IFNA2P01563 188 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 GAPDHP04406 335 aaKnown RBP7.77□□□□□ -1.17
COL12A1-208ENST00000486533 QDPRP09417 244 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 CD79AP11912 226 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 CD99P14209 185 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 PTGFRP43088 359 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 PJVKQ0ZLH3 352 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 SGCAQ16586 387 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 PABPC1L2AQ5JQF8 200 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 FAM74A1Q5RGS3 127 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF474Q6S9Z5 364 aaPredicted RBP7.77□□□□□ -1.17
COL12A1-208ENST00000486533 FOXL2NBQ6ZUU3 175 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 FAM214BQ7L5A3 538 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 LHFPL1Q86WI0 220 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 IQCF2Q8IXL9 164 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 GVQW1Q8N7I0 195 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 OR10S1Q8NGN2 331 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 OR14K1Q8NGZ2 314 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 OR10D3Q8NH80 312 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 CMBLQ96DG6 245 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF75AQ96N20 296 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 NPAS1Q99742 590 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 EMC6Q9BV81 110 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 SEC11CQ9BY50 192 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 CHST5Q9GZS9 411 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 EHFQ9NZC4 300 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 MCTS1Q9ULC4 181 aaKnown RBP7.77□□□□□ -1.17
COL12A1-208ENST00000486533 PROCRQ9UNN8 238 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 V9GYS6 101 aa7.77□□□□□ -1.17
COL12A1-208ENST00000486533 BORCS7-ASMTA0A0B4J1R7 106 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 IGKV1D-43A0A0B4J1Z2 117 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 F8W036 122 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 TNFSF11O14788 317 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 CXCL13O43927 109 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 JTBO76095 146 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SYNGR4O95473 234 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 CSTBP04080 98 aaKnown RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 CTSDP07339 412 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 KLK2P20151 261 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 PVALBP20472 110 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 DTYMKP23919 212 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SFTPDP35247 375 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 OR3A4PP47883 348 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SNU13P55769 128 aaKnown RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 TSC22D1Q15714 1073 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SWI5Q1ZZU3 235 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SLC22A6Q4U2R8 563 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 OTPQ5XKR4 325 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 Q6ZSR3 168 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 TMPPEQ6ZT21 453 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SLC16A14Q7RTX9 510 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SKA3Q8IX90 412 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 ADAD2Q8NCV1 583 aaKnown RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 OR1S2Q8NGQ3 325 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 POC1BQ8TC44 478 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 TMEM54Q969K7 222 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 WFIKKN1Q96NZ8 548 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 C1QTNF6Q9BXI9 259 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 METTL9Q9H1A3 318 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 PLEKHF2Q9H8W4 249 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 TREM1Q9NP99 234 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 ELOVL5Q9NYP7 299 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 LPAR3Q9UBY5 353 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 MLXQ9UH92 298 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 FBXO9Q9UK97 447 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 HSF4Q9ULV5 492 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF705EA8MWA4 302 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 C16orf97H3BN30 126 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 DNASE2O00115 360 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 CST4P01036 141 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 CGAP01215 116 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 IGLV3-1P01715 115 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SERPINA5P05154 406 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 NAT2P11245 290 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 BLVRBP30043 206 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 CCKARP32238 428 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 NPY4RP50391 375 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 P2RY4P51582 365 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 CLDN17P56750 224 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 RAC1P63000 192 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SRPXP78539 464 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 RAB35Q15286 201 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 KISS1Q15726 138 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 DEFB113Q30KQ7 82 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 TMEM176BQ3YBM2 270 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 BEX5Q5H9J7 111 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 C10orf91Q5T1B1 145 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 TGIF2LYQ8IUE0 185 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF610Q8N9Z0 462 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms