RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NIPAL2Q9H841 368 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 SEBOXQ9HB31 216 aaPredicted RBP6.23□□□□□ -1.41
XRN1-212ENST00000486211 AP5S1Q9NUS5 200 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 TAS2R3Q9NYW6 316 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 IL36RNQ9UBH0 155 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 MRPS28Q9Y2Q9 187 aaKnown RBP6.23□□□□□ -1.41
XRN1-212ENST00000486211 U3KQV3 271 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 TRGV10A0A0A0MS01 117 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 IGHV3-72A0A0B4J1Y9 119 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 TRBV4-1A0A0J9YWV2 114 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 IZUMO1RA6ND01 250 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 H0Y980 276 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 J3QR06 171 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 MGST3O14880 152 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 RTL8CO15255 209 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 ATF4P18848 351 aaPredicted RBP6.22□□□□□ -1.41
XRN1-212ENST00000486211 PI3P19957 117 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 GABRR1P24046 479 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 FMO3P31513 532 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 SOX6P35712 828 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 CBX1P83916 185 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 TNFRSF9Q07011 255 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 IFFO1Q0D2I5 559 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 IL24Q13007 206 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 MADCAM1Q13477 382 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 KIR3DS1Q14943 382 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 C17orf58Q2M2W7 97 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 LCN1P1Q5VSP4 162 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 TRPM8Q7Z2W7 1104 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 ANGPTL5Q86XS5 388 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 FAM86B1Q8N7N1 296 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 MAPKAPK5-AS1Q8N8E1 139 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 GPR173Q9NS66 373 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 ING3Q9NXR8 418 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 MTCH1Q9NZJ7 389 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
XRN1-212ENST00000486211 AMMECR1Q9Y4X0 333 aaPredicted RBP6.22□□□□□ -1.41
XRN1-212ENST00000486211 WSB1Q9Y6I7 421 aa6.22□□□□□ -1.41
XRN1-212ENST00000486211 IGHV1-3A0A0C4DH29 117 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 FXYD1O00168 92 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 ANGPT2O15123 496 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 SOX15O60248 233 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 HAND1O96004 215 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 NRASP01111 189 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 IGLV3-1P01715 115 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 IGHV3-7P01780 117 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 HSPB1P04792 205 aaKnown RBP6.21□□□□□ -1.42
XRN1-212ENST00000486211 GYPBP06028 91 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 PTGFRP43088 359 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 GLIPR1P48060 266 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 F2RL1P55085 397 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 ZNF91Q05481 1191 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 MFGE8Q08431 387 aaPredicted RBP6.21□□□□□ -1.42
XRN1-212ENST00000486211 ZNF816Q0VGE8 651 aaPredicted RBP6.21□□□□□ -1.42
XRN1-212ENST00000486211 GALEQ14376 348 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 KPNB1Q14974 876 aaKnown RBP6.21□□□□□ -1.42
XRN1-212ENST00000486211 ANKRD39Q53RE8 183 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 ZNF684Q5T5D7 378 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 LINC01590Q5TEZ4 76 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 TMEM42Q69YG0 159 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 ERICH5Q6P6B1 374 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 DEFB125Q8N687 156 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 MINDY2Q8NBR6 621 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 TMEM104Q8NE00 496 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 OR52L1Q8NGH7 329 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 OR2T10Q8NGZ9 312 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 PHLDA1Q8WV24 401 aaPredicted RBP6.21□□□□□ -1.42
XRN1-212ENST00000486211 LEAP2Q969E1 77 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 CEP19Q96LK0 163 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 RASL11BQ9BPW5 248 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 TMEM109Q9BVC6 243 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 NMNAT2Q9BZQ4 307 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 PKIBQ9C010 78 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 WFDC10AQ9H1F0 79 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 DCAF13Q9NV06 445 aaKnown RBP6.21□□□□□ -1.42
XRN1-212ENST00000486211 FBXO7Q9Y3I1 522 aa6.21□□□□□ -1.42
XRN1-212ENST00000486211 A0A0U1RQV5 110 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 ATP6V0E1O15342 81 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 TFAP2AP05549 437 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 H1F0P07305 194 aaKnown RBP6.2□□□□□ -1.42
XRN1-212ENST00000486211 H2BFMP0C1H6 154 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 CGB3P0DN86 165 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 CGB7P0DN87 165 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 CLUP10909 449 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 ATP6V1B1P15313 513 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 SPI1P17947 270 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 NFYBP25208 207 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 CD81P60033 236 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 RIPPLY1Q0D2K3 151 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 KLF10Q13118 480 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 IFI44LQ53G44 452 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 TNFAIP8L3Q5GJ75 292 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 SLX4IPQ5VYV7 408 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 LCN12Q6JVE5 192 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 ASRGL1Q7L266 308 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 LYG2Q86SG7 212 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 Q8N1X5 172 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms