RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 RHOFQ9HBH0 211 aa13.75□□□□□ -0.21
SMC4-216ENST00000485645 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
SMC4-216ENST00000485645 OR4C45A6NMZ5 311 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 ADARB2-AS1A8MUL3 147 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 GLIPR1P48060 266 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 ARHGDIBP52566 201 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 BAIAP2L2Q6UXY1 529 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 SAXO1Q8IYX7 474 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 ZCCHC4Q9H5U6 513 aa13.74□□□□□ -0.21
SMC4-216ENST00000485645 FAM172BPA6NC97 362 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 LEUTXA8MZ59 168 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 CSN2P05814 226 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 CD24P25063 80 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 ZSCAN26Q16670 478 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 KRBOX4Q5JUW0 171 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 CHST4Q8NCG5 386 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 OR4D6Q8NGJ1 314 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 CREB3L1Q96BA8 519 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 LGALS12Q96DT0 336 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 LIN7BQ9HAP6 207 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 ING3Q9NXR8 418 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 DNAH3Q8TD57 4116 aa13.73□□□□□ -0.21
SMC4-216ENST00000485645 ODAMA1E959 279 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 TOR1AO14656 332 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 DEGS1O15121 323 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 IGLV1-47P01700 117 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 HCKP08631 526 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 RPSAP08865 295 aaKnown RBP13.72□□□□□ -0.21
SMC4-216ENST00000485645 TMEM225BP0DP42 221 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 CD34P28906 385 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 CEACAM3P40198 252 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 PTGFRP43088 359 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 CD83Q01151 205 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 GALEQ14376 348 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 Q6P435 159 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 Q6ZPA2 131 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 CENPVQ7Z7K6 275 aaPredicted RBP13.72□□□□□ -0.21
SMC4-216ENST00000485645 LHFPL3Q86UP9 236 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 SERPINA12Q8IW75 414 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 OR5D14Q8NGL3 314 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 SGCDQ92629 289 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 SLC25A33Q9BSK2 321 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 ALG8Q9BVK2 526 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 ZNF286AQ9HBT8 521 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 AASSQ9UDR5 926 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 MYRFQ9Y2G1 1151 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 GMPPBQ9Y5P6 360 aa13.72□□□□□ -0.21
SMC4-216ENST00000485645 SLC33A1O00400 549 aaPredicted RBP13.71□□□□□ -0.21
SMC4-216ENST00000485645 PIN1P1O15428 100 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 SULT1B1O43704 296 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 ALX3O95076 343 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.21
SMC4-216ENST00000485645 GDNFP39905 211 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 PRRX1P54821 245 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 ATXN7L3Q14CW9 347 aaPredicted RBP13.71□□□□□ -0.21
SMC4-216ENST00000485645 KISS1Q15726 138 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 SYS1Q8N2H4 156 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 MRAPQ8TCY5 172 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 COQ2Q96H96 371 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 NECAP2Q9NVZ3 263 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 OR6C3Q9NZP0 311 aa13.71□□□□□ -0.21
SMC4-216ENST00000485645 A0A1W2PRX2 142 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 TMEM212A6NML5 194 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 ZNF729A6NN14 1252 aaPredicted RBP13.7□□□□□ -0.22
SMC4-216ENST00000485645 BUB1B-PAK6H3BSN5 160 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 OR2F2O95006 317 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 LPLP06858 475 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 CD33P20138 364 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 ZP1P60852 638 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 GABPB1Q06547 395 aaPredicted RBP13.7□□□□□ -0.22
SMC4-216ENST00000485645 MRPL28Q13084 256 aaKnown RBP13.7□□□□□ -0.22
SMC4-216ENST00000485645 CDK5R1Q15078 307 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 ABCA11PQ4W5N1 156 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 TPTE2P1Q5T6R2 138 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 PARP16Q8N5Y8 322 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 Q96MT0 163 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 RDH12Q96NR8 316 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 RBM14Q96PK6 669 aaKnown RBP13.7□□□□□ -0.22
SMC4-216ENST00000485645 ISG20L2Q9H9L3 353 aaKnown RBP13.7□□□□□ -0.22
SMC4-216ENST00000485645 FAM118AQ9NWS6 357 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 DHDHQ9UQ10 334 aa13.7□□□□□ -0.22
SMC4-216ENST00000485645 A0A087X0M5 115 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 LOC100130705A0A1B0GUX0 176 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 A0A1B0GX30 115 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 MPZL2O60487 215 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 ZFPL1O95159 310 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 FADS2O95864 444 aaKnown RBP13.69□□□□□ -0.22
SMC4-216ENST00000485645 CCDC159P0C7I6 412 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 PF4V1P10720 104 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 GABRB1P18505 474 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 MNDAP41218 407 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 MTNR1BP49286 362 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 RBM39Q14498 530 aaKnown RBP13.69□□□□□ -0.22
SMC4-216ENST00000485645 RCN1Q15293 331 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 C17orf58Q2M2W7 97 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 ZNF691Q5VV52 312 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 CCDC144NLQ6NUI1 221 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms