RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 NEK7Q8TDX7 302 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 TMEM158Q8WZ71 300 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 ORAI1Q96D31 301 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 SEH1LQ96EE3 360 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 DCTN5Q9BTE1 182 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 TMEM59Q9BXS4 323 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 SELENOIQ9C0D9 397 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 OR51E2Q9H255 320 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 PPIL3Q9H2H8 161 aaKnown RBP6.86□□□□□ -1.31
SF3A1-208ENST00000485618 NCOR1P1Q9H4R4 102 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 OR6C3Q9NZP0 311 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 RAB22AQ9UL26 194 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 INSIG2Q9Y5U4 225 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 KPTNQ9Y664 436 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 CR1P17927 2039 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 IFITM5A6NNB3 132 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 M0R1W7 72 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 SIRPB1O00241 398 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 TOX4O94842 621 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 MPIG6BO95866 241 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 OR2H2O95918 312 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 CSN2P05814 226 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 SRD5A1P18405 259 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 ADRA2CP18825 462 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 GZMHP20718 246 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 CFPP27918 469 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 SDC2P34741 201 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 P2RX3P56373 397 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 SCAND1P57086 179 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 MRPS15P82914 257 aaKnown RBP6.85□□□□□ -1.31
SF3A1-208ENST00000485618 PAX8Q06710 450 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 KRBOX4Q5JUW0 171 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 FAM120AOSQ5T036 256 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 TRAPPC6BQ86SZ2 158 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 FAM185AQ8N0U4 392 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 OR56B1Q8NGI3 324 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 OR4D6Q8NGJ1 314 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 OR13F1Q8NGS4 319 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 OR10K1Q8NGX5 313 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 C8orf46Q8TAG6 207 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 AP3S1Q92572 193 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 PTX4Q96A99 478 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 FAM3DQ96BQ1 224 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 YIPF6Q96EC8 236 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 BCL7BQ9BQE9 202 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 DPCDQ9BVM2 203 aaPredicted RBP6.85□□□□□ -1.31
SF3A1-208ENST00000485618 GAL3ST2Q9H3Q3 398 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 RIMS4Q9H426 269 aaPredicted RBP6.85□□□□□ -1.31
SF3A1-208ENST00000485618 METTL8Q9H825 291 aaKnown RBP6.85□□□□□ -1.31
SF3A1-208ENST00000485618 HEXA-AS1Q9H8Q6 139 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 ONECUT1Q9UBC0 465 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 CTSZQ9UBR2 303 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 FBLN5Q9UBX5 448 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 METRNQ9UJH8 293 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 UBE2J1Q9Y385 318 aaPredicted RBP6.85□□□□□ -1.31
SF3A1-208ENST00000485618 MAB21L2Q9Y586 359 aa6.85□□□□□ -1.31
SF3A1-208ENST00000485618 YLPM1P49750 1951 aaKnown RBP6.84□□□□□ -1.31
SF3A1-208ENST00000485618 TMEM30CPA0ZSE6 113 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 POM121CA8CG34 1229 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 SLC33A1O00400 549 aaPredicted RBP6.84□□□□□ -1.31
SF3A1-208ENST00000485618 GEMIN2O14893 280 aaKnown RBP6.84□□□□□ -1.31
SF3A1-208ENST00000485618 ZNF737O75373 536 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 IL1AP01583 271 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 RBP4P02753 201 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 VSIG8P0DPA2 414 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 CALCBP10092 127 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 RAB6AP20340 208 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 SEC61A1P61619 476 aaKnown RBP6.84□□□□□ -1.31
SF3A1-208ENST00000485618 ARF6P62330 175 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 GUCA2AQ02747 115 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 EDDM3AQ14507 147 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 P2RY14Q15391 338 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 TAF9Q16594 264 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 C2orf76Q3KRA6 126 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 PIGYQ3MUY2 71 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 HES5Q5TA89 166 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 GPR157Q5UAW9 335 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 OR52W1Q6IF63 320 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 RAB12Q6IQ22 244 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 TRAT1Q6PIZ9 186 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 RBMS3Q6XE24 437 aaKnown RBP6.84□□□□□ -1.31
SF3A1-208ENST00000485618 LYPD6Q86Y78 171 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 ANKRD13BQ86YJ7 626 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 LY6G5BQ8NDX9 201 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 RAB2BQ8WUD1 216 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 WDFY2Q96P53 400 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 PCGF1Q9BSM1 259 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 CENPOQ9BU64 300 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 FUNDC2Q9BWH2 189 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 CHST6Q9GZX3 395 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 BANF2Q9H503 90 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 LIN7BQ9HAP6 207 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 MMP26Q9NRE1 261 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 PLEKHJ1Q9NW61 149 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 KCNIP1Q9NZI2 227 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 ABRACLQ9P1F3 81 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 PEX16Q9Y5Y5 336 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 ETV7Q9Y603 341 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 LINC00312Q9Y6C7 94 aa6.84□□□□□ -1.31
SF3A1-208ENST00000485618 ATRQ13535 2644 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms