RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 C11orf71Q6IPW1 123 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 MEX3BQ6ZN04 569 aaKnown RBP8.48□□□□□ -1.05
HDAC6-226ENST00000483656 C5orf24Q7Z6I8 188 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 MUC15Q8N387 334 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 CD177Q8N6Q3 437 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 BOLLQ8N9W6 283 aaKnown RBP8.48□□□□□ -1.05
HDAC6-226ENST00000483656 PLPPR1Q8TBJ4 325 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 ERGIC1Q969X5 290 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 SLC6A7Q99884 636 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 DPCDQ9BVM2 203 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-226ENST00000483656 DPAGT1Q9H3H5 408 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 SPACA1Q9HBV2 294 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 TREM2Q9NZC2 230 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 RNF7Q9UBF6 113 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 OR14J1Q9UGF5 321 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 METRNQ9UJH8 293 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 ABCA4P78363 2273 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 CACNA1DQ01668 2161 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 ARFGEF3Q5TH69 2177 aa8.48□□□□□ -1.05
HDAC6-226ENST00000483656 IGKV1D-17A0A075B6S4 117 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 IGHV3OR15-7A0A075B7D8 119 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 A0A0B4J293 547 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 RFPL4AA6NLU0 287 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 MCRIP1C9JLW8 97 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 RFPL4AL1F8VTS6 287 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 H3BUI4 141 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 HSPB6O14558 160 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 PSPNO60542 156 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 CYB5R3P00387 301 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-226ENST00000483656 PMP2P02689 132 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 HPXP02790 462 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 DANCRP0C864 163 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 PSG2P11465 335 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 HRH1P35367 487 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 SMIM21Q3B7S5 101 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 SHEQ5VZ18 495 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 PLET1Q6UQ28 207 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 C20orf204Q6ZNR8 217 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 BTN2A1Q7KYR7 527 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 FAM90A1Q86YD7 464 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 GAPTQ8N292 157 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 BEST4Q8NFU0 473 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 OR5T2Q8NGG2 359 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 OR51S1Q8NGJ8 323 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 OR4K15Q8NH41 348 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 MRPL30Q8TCC3 161 aaKnown RBP8.47□□□□□ -1.05
HDAC6-226ENST00000483656 MRGPRFQ96AM1 343 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 CHST6Q9GZX3 395 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 MS4A5Q9H3V2 200 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 SEBOXQ9HB31 216 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-226ENST00000483656 DYNLRB1Q9NP97 96 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 MCUBQ9NWR8 336 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 ZNF222Q9UK12 451 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 FLVCR2Q9UPI3 526 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 PPP1R3CQ9UQK1 317 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 WIPI2Q9Y4P8 454 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 SPTAN1Q13813 2472 aaKnown RBP8.47□□□□□ -1.05
HDAC6-226ENST00000483656 ABCA12Q86UK0 2595 aa8.47□□□□□ -1.05
HDAC6-226ENST00000483656 TEX15Q9BXT5 2789 aa8.46□□□□□ -1.05
HDAC6-226ENST00000483656 LRBAP50851 2863 aa8.46□□□□□ -1.05
HDAC6-226ENST00000483656 TRBV6-6A0A0A6YYG2 114 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 A6NNC1 897 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 IFNL4K9M1U5 179 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF737O75373 536 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 NDUFB6O95139 128 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF205O95201 554 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 AMY2AP04746 511 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 SOD3P08294 240 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 TNFRSF1AP19438 455 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 TBPP20226 339 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 PRDX2P32119 198 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 FAUP35544 74 aaKnown RBP8.46□□□□□ -1.06
HDAC6-226ENST00000483656 PPOXP50336 477 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 COL10A1Q03692 680 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 MEF2DQ14814 521 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 PAN3Q58A45 887 aaKnown RBP8.46□□□□□ -1.06
HDAC6-226ENST00000483656 RNASE10Q5GAN6 216 aaKnown RBP8.46□□□□□ -1.06
HDAC6-226ENST00000483656 VAX1Q5SQQ9 334 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF880Q6PDB4 577 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 FIP1L1Q6UN15 594 aaKnown RBP8.46□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF782Q6ZMW2 699 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-226ENST00000483656 C17orf107Q6ZR85 190 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 CADM3Q8N126 398 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 OR13C8Q8NGS7 320 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 OR11L1Q8NGX0 322 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 ANGPTL6Q8NI99 470 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 EGLN1Q9GZT9 426 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 SHARPINQ9H0F6 387 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 PPA2Q9H2U2 334 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 TMEM165Q9HC07 324 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 Q9N2K0 584 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 C12orf4Q9NQ89 552 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF701Q9NV72 531 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-226ENST00000483656 ETAA1Q9NY74 926 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 EDARQ9UNE0 448 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 KLF2Q9Y5W3 355 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-226ENST00000483656 NUBP2Q9Y5Y2 271 aa8.46□□□□□ -1.06
HDAC6-226ENST00000483656 DYSFO75923 2080 aa8.45□□□□□ -1.06
HDAC6-226ENST00000483656 TRAV6A0A075B6T7 132 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms