RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MELTFP08582 738 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 ZNF44P15621 663 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 GP2P55259 537 aaKnown RBP14.7□□□□□ -0.06
HDAC6-225ENST00000483506 ERVFRD-1P60508 538 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 PAX5Q02548 391 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 PRB3Q04118 309 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-225ENST00000483506 EDDM3AQ14507 147 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 ACSM3Q53FZ2 586 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 OR10K1Q8NGX5 313 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 ZDHHC16Q969W1 377 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 SLC25A28Q96A46 364 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 ZNF714Q96N38 554 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 NKX3-1Q99801 234 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-225ENST00000483506 HEXA-AS1Q9H8Q6 139 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 SF3B6Q9Y3B4 125 aaKnown RBP14.7□□□□□ -0.06
HDAC6-225ENST00000483506 POMT1Q9Y6A1 747 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 TMEM89A2RUT3 159 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 FUOMA2VDF0 154 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 MEGF11A6BM72 1044 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 DEGS1O15121 323 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 HOXA3O43365 443 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-225ENST00000483506 CPEP16870 476 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 COMPP49747 757 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-225ENST00000483506 INSL4Q14641 139 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 MIDNQ504T8 468 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 LIPKQ5VXJ0 399 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 LINC00596Q86U02 117 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 PHYHIPQ92561 330 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 CORO2AQ92828 525 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 UQCC2Q9BRT2 126 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 TMED9Q9BVK6 235 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 CCDC90BQ9GZT6 254 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 PCDHB16Q9NRJ7 776 aa14.69□□□□□ -0.06
HDAC6-225ENST00000483506 UBE2J1Q9Y385 318 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-225ENST00000483506 TRAV24A0A0B4J272 114 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 HTR3BO95264 441 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 MAS1P04201 325 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 FBP1P09467 338 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 UCHL1P09936 223 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 SAA4P35542 130 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 MAP2K4P45985 399 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 RBM11P57052 281 aaKnown RBP14.68□□□□□ -0.06
HDAC6-225ENST00000483506 TRAM1Q15629 374 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 PIGYQ3MUY2 71 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 OSR2Q8N2R0 312 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 TPRX1Q8N7U7 411 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 SSMEM1Q8WWF3 244 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 COQ2Q96H96 371 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 AJUBAQ96IF1 538 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 DUX5Q96PT3 197 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 S100A13Q99584 98 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 MGLLQ99685 303 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 PPA2Q9H2U2 334 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 NCOR1P1Q9H4R4 102 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 ZNRD1Q9P1U0 126 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 ING4Q9UNL4 249 aa14.68□□□□□ -0.06
HDAC6-225ENST00000483506 IGHV1-8P0DP01 117 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 CD37P11049 281 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 PSMA1P25786 263 aaKnown RBP14.67□□□□□ -0.06
HDAC6-225ENST00000483506 IER3P46695 156 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 KCNJ3P48549 501 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 SCN1BQ07699 218 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 GPR176Q14439 515 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 FAM27D1Q5T7N8 215 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 ZNF367Q7RTV3 350 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 LRRTM1Q86UE6 522 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 PNKDQ8N490 385 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 JAGN1Q8N5M9 183 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 MUL1Q969V5 352 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 MRPS24Q96EL2 167 aaKnown RBP14.67□□□□□ -0.06
HDAC6-225ENST00000483506 YTHDF1Q9BYJ9 559 aaKnown RBP14.67□□□□□ -0.06
HDAC6-225ENST00000483506 ACOT13Q9NPJ3 140 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 ST3GAL6Q9Y274 331 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 MRPS28Q9Y2Q9 187 aaKnown RBP14.67□□□□□ -0.06
HDAC6-225ENST00000483506 FAM96BQ9Y3D0 163 aa14.67□□□□□ -0.06
HDAC6-225ENST00000483506 ODAMA1E959 279 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 MEIOCA2RUB1 952 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 CSTBP04080 98 aaKnown RBP14.66□□□□□ -0.06
HDAC6-225ENST00000483506 HSMCR30P0CW71 290 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 HKR1P10072 659 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 GTF2F2P13984 249 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 SERPINA2P20848 420 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 ACTG1P63261 375 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 AESQ08117 197 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 MPV17LQ2QL34 196 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 C16orf87Q6PH81 154 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 TMEM91Q6ZNR0 172 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 OR11H6Q8NGC7 330 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 OR4D6Q8NGJ1 314 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 NR1H4Q96RI1 486 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-225ENST00000483506 PPIL3Q9H2H8 161 aaKnown RBP14.66□□□□□ -0.06
HDAC6-225ENST00000483506 TAS2R3Q9NYW6 316 aa14.66□□□□□ -0.06
HDAC6-225ENST00000483506 KIAA2026Q5HYC2 2103 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 TRGV10A0A0A0MS01 117 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 ODF3BA8MYP8 253 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 CLPXO76031 633 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 SRMP19623 302 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 GLIPR1P48060 266 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 RPS25P62851 125 aaKnown RBP14.65□□□□□ -0.06
HDAC6-225ENST00000483506 ATXN7L3Q14CW9 347 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms