RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 SLC38A9Q8NBW4 561 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 FBXO22Q8NEZ5 403 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 ZC2HC1AQ96GY0 325 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 EFCAB11Q9BUY7 163 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 RXFP3Q9NSD7 469 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 C1orf123Q9NWV4 160 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 CISD1Q9NZ45 108 aaKnown RBP6.82□□□□□ -1.32
COL4A5-205ENST00000483338 BCL2P10415 239 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 IL3RAP26951 378 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 BSGP35613 385 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF93P35789 620 aaPredicted RBP6.82□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF83P51522 516 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 NCBP2P52298 156 aaKnown RBP eCLIP6.82□□□□□ -1.32
COL4A5-205ENST00000483338 TBPL1P62380 186 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 OR1Q1Q15612 314 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 BSXQ3C1V8 233 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 PRAMEF5Q5TYX0 476 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 PRAMEF6Q5VXH4 476 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 DNM1P34Q6PK57 102 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 VASH2Q86V25 355 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 BATF2Q8N1L9 274 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 MUC15Q8N387 334 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 ZIC4Q8N9L1 334 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 OR1B1Q8NGR6 318 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 OR13G1Q8NGZ3 307 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 WBP2Q969T9 261 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 WDR34Q96EX3 536 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 RSG1Q9BU20 258 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 IL23AQ9NPF7 189 aa6.82□□□□□ -1.32
COL4A5-205ENST00000483338 SCN10AQ9Y5Y9 1956 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 MT-CO2P00403 227 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ADMP35318 185 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 DEFB103AP81534 67 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 MSMO1Q15800 293 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF440Q8IYI8 595 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 LILRA3Q8N6C8 439 aaPredicted RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 GLYATL1Q969I3 302 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ATP5SQ99766 215 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 GTSF1LQ9H1H1 148 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF665Q9H7R5 613 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 NAT8Q9UHE5 227 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 MED31Q9Y3C7 131 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 INSL5Q9Y5Q6 135 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 IGLV3-16A0A075B6K0 115 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 OR6C6A6NF89 314 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 LRRC3CA6NJW4 275 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 UCP1P25874 307 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 GDF1P27539 372 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 RBMXP38159 391 aaKnown RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 VASPP50552 380 aaPredicted RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 CKS1BP61024 79 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 RPL23P62829 140 aaKnown RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 CSNK1G2P78368 415 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 PSG9Q00887 426 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF117Q03924 483 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 MLC1Q15049 377 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 HLA-BQ31612 363 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 PLPPR5Q32ZL2 321 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 KIAA1644Q3SXP7 199 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 WDR38Q5JTN6 314 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 RAET1LQ5VY80 246 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 FBXL14Q8N1E6 418 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 DTWD2Q8NBA8 298 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 OR2Z1Q8NG97 314 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF480Q8WV37 535 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 PPP1R14AQ96A00 147 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 OR51I2Q9H344 312 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 TAS2R4Q9NYW5 299 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 LHX3Q9UBR4 397 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 TET1Q8NFU7 2136 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 SCN2AQ99250 2005 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 FAM166BA8MTA8 275 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 SOX1O00570 391 aaPredicted RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 CD99P14209 185 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ALOX5APP20292 161 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 RPS27P42677 84 aaKnown RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 GPR6P46095 362 aaPredicted RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 CLDN15P56746 228 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 RUNX1Q01196 453 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 DUSP2Q05923 314 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 VAX1Q5SQQ9 334 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 MRPL21Q7Z2W9 205 aaKnown RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 PNKDQ8N490 385 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 OR2Y1Q8NGV0 311 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 WDYHV1Q96HA8 205 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 C4orf45Q96LM5 186 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 SMIM7Q9BQ49 75 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 WNT10AQ9GZT5 417 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 LSM7Q9UK45 103 aaKnown RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 TBL2Q9Y4P3 447 aaKnown RBP6.81□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF780BQ9Y6R6 833 aa6.81□□□□□ -1.32
COL4A5-205ENST00000483338 GLOD5A6NK44 160 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 HBE1P02100 147 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 CRYGCP07315 174 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 NGFRP08138 427 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 IGLC1P0CG04 106 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 CDKN2AP42771 156 aaKnown RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 EWSR1Q01844 656 aaKnown RBP eCLIP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 POU3F1Q03052 451 aaPredicted RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 TXNDC8Q6A555 127 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms