RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 V9GY05 133 aa4.21□□□□□ -1.74
USP40-213ENST00000483216 ZNF638Q14966 1978 aaKnown RBP4.21□□□□□ -1.74
USP40-213ENST00000483216 A0A087WWC5 75 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 TRBV2A0A0J9YWF9 115 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 A0A1B0GW64 132 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 A0A1W2PNU3 283 aaPredicted RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 MYBPHLA2RUH7 354 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 ARL5CA6NH57 179 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR2AG2A6NM03 316 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 IFITM5A6NNB3 132 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 ZNF705EA8MWA4 302 aaPredicted RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 WASH3PC4AMC7 463 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 C11orf98E9PRG8 122 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 G3V3Y1 287 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SLC17A2O00624 439 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR1I1O60431 355 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 CTNSO60931 367 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 IGSF6O95976 241 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 MT-ND4P03905 459 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 GAPDHP04406 335 aaKnown RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 IFNA6P05013 189 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 EIF4EP06730 217 aaKnown RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 CD3GP09693 182 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 IFI6P09912 130 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 CLUP10909 449 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 CD79AP11912 226 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 GTF2F2P13984 249 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 RAB5AP20339 215 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 DRD5P21918 477 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 GABRR1P24046 479 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 PSMB6P28072 239 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 GPR4P46093 362 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR1E2P47887 323 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 CCR6P51684 374 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SGSHP51688 502 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 METAP1P53582 386 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 MAXP61244 160 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 HBA1P69905 142 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SYPL1Q16563 259 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SLC5A12Q1EHB4 618 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 ISXQ2M1V0 245 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR2B11Q5JQS5 317 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 EOGTQ5NDL2 527 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SAPCD1Q5SSQ6 148 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 C9orf129Q5T035 196 aaKnown RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 DMKNQ6E0U4 476 aaPredicted RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 TMEM91Q6ZNR0 172 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 Q6ZPB1 254 aaPredicted RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 TPGS1Q6ZTW0 290 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 MBOAT2Q6ZWT7 520 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SSX6Q7RTT6 188 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR2W3Q7Z3T1 314 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 TAF8Q7Z7C8 310 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 DPPA2Q7Z7J5 298 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 YRDCQ86U90 279 aaKnown RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 THOC6Q86W42 341 aaKnown RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 TRAPPC5Q8IUR0 188 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR2L5Q8NG80 312 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR10H4Q8NGA5 316 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR2AP1Q8NGE2 309 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR10R2Q8NGX6 335 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 OR6X1Q8NH79 312 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 AKR7LQ8NHP1 331 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 RFESDQ8TAC1 157 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 M1APQ8TC57 530 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 RXFP4Q8TDU9 374 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 EXOSC8Q96B26 276 aaKnown RBP4.2□□□□□ -1.74
USP40-213ENST00000483216 ECHDC3Q96DC8 303 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SLC35G5Q96KT7 338 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 PRAP1Q96NZ9 151 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 DEFB118Q96PH6 123 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 MICU1Q9BPX6 476 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 AIF1LQ9BQI0 150 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 APOOQ9BUR5 198 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 PDFQ9HBH1 243 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 KCNJ16Q9NPI9 418 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 CMC2Q9NRP2 79 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 ASF1BQ9NVP2 202 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 SLC2A8Q9NY64 477 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 PIPOXQ9P0Z9 390 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 DPM3Q9P2X0 92 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 MTCH2Q9Y6C9 303 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 PTPRDP23468 1912 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 PATJQ8NI35 1801 aa4.2□□□□□ -1.74
USP40-213ENST00000483216 COL4A4P53420 1690 aaPredicted RBP4.19□□□□□ -1.74
USP40-213ENST00000483216 TRBV6-7A0A0A0MS04 114 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 SMCO3A2RU48 225 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 FAM74A7A6NL05 159 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 COLCA2A8K830 154 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 PPP5D1E7EU14 171 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 NPIPA2E9PIF3 369 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 RNASEK-C17orf49H0YIS7 233 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 LGALS8O00214 317 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 TCAPO15273 167 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 ZNF208O43345 1280 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 LATO43561 262 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 EIF4E2O60573 245 aaKnown RBP4.19□□□□□ -1.74
USP40-213ENST00000483216 SLC2A10O95528 541 aa4.19□□□□□ -1.74
USP40-213ENST00000483216 C6orf47O95873 294 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms