RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 SPATA46Q5T0L3 261 aa12.04□□□□□ -0.48
PHF3-204ENST00000481385 C20orf204Q6ZNR8 217 aa12.04□□□□□ -0.48
PHF3-204ENST00000481385 PUSL1Q8N0Z8 303 aaKnown RBP12.04□□□□□ -0.48
PHF3-204ENST00000481385 IL22RA1Q8N6P7 574 aa12.04□□□□□ -0.48
PHF3-204ENST00000481385 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
PHF3-204ENST00000481385 TNRC6AQ8NDV7 1962 aaKnown RBP12.04□□□□□ -0.48
PHF3-204ENST00000481385 ARGFXA6NJG6 315 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 CD300LBA8K4G0 201 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 H7C1Q1 480 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 NAPSAO96009 420 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 COX5BP10606 129 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 MEX3BQ6ZN04 569 aaKnown RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 SLC35G3Q8N808 338 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 LRTM2Q8N967 370 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 ARL11Q969Q4 196 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 SMIM8Q96KF7 97 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 USB1Q9BQ65 265 aaKnown RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 NKX6-2Q9C056 277 aaPredicted RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 WFDC1Q9HC57 220 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 WISP2O76076 250 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 GLP1RP43220 463 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 UCP3P55916 312 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 PMP22Q01453 160 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 SRSF6Q13247 344 aaKnown RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 HAGHLQ6PII5 290 aaPredicted RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 CCDC36Q8IYA8 594 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 C17orf78Q8N4C9 275 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 ZFP62Q8NB50 900 aaPredicted RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 LOXL4Q96JB6 756 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 SUCNR1Q9BXA5 334 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 RNF122Q9H9V4 155 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 Q9N2K0 584 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 MMP26Q9NRE1 261 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 PCDHB16Q9NRJ7 776 aa12.03□□□□□ -0.48
PHF3-204ENST00000481385 RCC2Q9P258 522 aaKnown RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 KLF13Q9Y2Y9 288 aaPredicted RBP12.03□□□□□ -0.48
PHF3-204ENST00000481385 HERV-K104P61576 105 aa12.02□□□□□ -0.48
PHF3-204ENST00000481385 SLC10A1Q14973 349 aa12.02□□□□□ -0.48
PHF3-204ENST00000481385 RNPS1Q15287 305 aaKnown RBP12.02□□□□□ -0.48
PHF3-204ENST00000481385 WDYHV1Q96HA8 205 aa12.02□□□□□ -0.48
PHF3-204ENST00000481385 PCNX2A6NKB5 2137 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 CDK2AP1O14519 115 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 TAAR5O14804 337 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 MED6O75586 246 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 ARR3P36575 388 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 PMELP40967 661 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 KCNJ3P48549 501 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 ZNF818PQ6ZRF7 136 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 LDLRAD3Q86YD5 345 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 MCEMP1Q8IX19 187 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 OR5P3Q8WZ94 311 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 TLNRD1Q9H1K6 362 aa12.02□□□□□ -0.49
PHF3-204ENST00000481385 A0A1W2PR80 420 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 KLRC4-KLRK1H3BQV0 150 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 MPPED1O15442 326 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 RHBDL1O75783 438 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 CELA3BP08861 270 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 PRKACAP17612 351 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 ZNF169Q14929 603 aaPredicted RBP12.01□□□□□ -0.49
PHF3-204ENST00000481385 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 MDP1Q86V88 176 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 TSNAXQ99598 290 aaKnown RBP12.01□□□□□ -0.49
PHF3-204ENST00000481385 C3orf85A0A1B0GTC6 90 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 MUC1P15941 1255 aaPredicted RBP12.01□□□□□ -0.49
PHF3-204ENST00000481385 SAXO1Q8IYX7 474 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 SECTM1Q8WVN6 248 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A18PA6NE21 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A16PA6NEW6 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A20PA6NIJ5 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A7PA6NKC0 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A22PA8MWA6 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A12PA8MX19 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A5PA8MXJ8 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A23PA8MXZ1 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 AGPAT2O15120 278 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A15PP0C7V4 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A13PP0C7W8 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A14PP0C7W9 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 FAM90A24PP0C7X0 464 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 IL32P24001 234 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 PJVKQ0ZLH3 352 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 TMEM88Q6PEY1 159 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 TBC1D26Q86UD7 250 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 LGI3Q8N145 548 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 GAPTQ8N292 157 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 DMBX1Q8NFW5 382 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 OR5A2Q8NGI9 324 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 BCL2L2Q92843 193 aaPredicted RBP12.01□□□□□ -0.49
PHF3-204ENST00000481385 FER1L6-AS2Q96M78 137 aa12.01□□□□□ -0.49
PHF3-204ENST00000481385 RHOFQ9HBH0 211 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms