RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ODAMA1E959 279 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 ZNF729A6NN14 1252 aaPredicted RBP9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 LEUTXA8MZ59 168 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 SIRPB1O00241 398 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 ZFPL1O95159 310 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 IGLV1-47P01700 117 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 HCKP08631 526 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 DUSP1P28562 367 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 KCNJ3P48549 501 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 RAB13P51153 203 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 GBX2P52951 348 aaPredicted RBP9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 ZP1P60852 638 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 IL13RA2Q14627 380 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 KISS1Q15726 138 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 ZIK1Q3SY52 487 aaPredicted RBP9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 KLHL22Q53GT1 634 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 PLA1AQ53H76 456 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 SAMD5Q5TGI4 173 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 CCDC144NLQ6NUI1 221 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 TMEM219Q86XT9 240 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 ABHD12Q8N2K0 398 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 OR4D6Q8NGJ1 314 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 OR10AC1Q8NH08 325 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 OR5AK2Q8NH90 309 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 PCDHB16Q9NRJ7 776 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 ERVK13-1Q9NX77 482 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 DHDHQ9UQ10 334 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 HILPDAQ9Y5L2 63 aa9.75□□□□□ -0.85
SQSTM1-207ENST00000481335 LOC100130705A0A1B0GUX0 176 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 M0QZK8 103 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 SLC33A1O00400 549 aaPredicted RBP9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 MAGEB3O15480 346 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 CD2P06729 351 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 CDK2P24941 298 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 VDAC2P45880 294 aaPredicted RBP9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 PRRX1P54821 245 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 HLA-DRB5Q30154 266 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 BEAN1Q3B7T3 259 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 CCDC58Q4VC31 144 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 ARSJQ5FYB0 599 aaPredicted RBP9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 KRBOX4Q5JUW0 171 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 LPCAT4Q643R3 524 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 ZNF529Q6P280 563 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 Q6P435 159 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 LHFPL3Q86UP9 236 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 ZNF565Q8N9K5 539 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 Q8NFD4 153 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 OR51T1Q8NGJ9 327 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 TSEN15Q8WW01 171 aaKnown RBP9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 CAPSLQ8WWF8 208 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 RFT1Q96AA3 541 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 ZNF649Q9BS31 505 aa9.74□□□□□ -0.85
SQSTM1-207ENST00000481335 IRGMA1A4Y4 181 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 MEX3AA1L020 520 aaKnown RBP9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 DEGS1O15121 323 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 MMP23AO75900 390 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 OR2F2O95006 317 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 TMEM225BP0DP42 221 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 RAB3AP20336 220 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 MNDAP41218 407 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 GLIPR1P48060 266 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 SNU13P55769 128 aaKnown RBP9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 AESQ08117 197 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 CDK5R1Q15078 307 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 PRAMEF5Q5TYX0 476 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 ZNF691Q5VV52 312 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 PQLC1Q8N2U9 271 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 OR5D18Q8NGL1 313 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 COQ2Q96H96 371 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 SPACA5Q96QH8 159 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 OCSTAMPQ9BR26 566 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 LINC00574Q9H8X3 128 aa9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 ISG20L2Q9H9L3 353 aaKnown RBP9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 AMMECR1Q9Y4X0 333 aaPredicted RBP9.73□□□□□ -0.85
SQSTM1-207ENST00000481335 KBTBD11-OT1A0A1B0GTJ5 212 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 H0YJX3 145 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 BUB1B-PAK6H3BSN5 160 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 TOR1AO14656 332 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 CD28P10747 220 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 DCKP27707 260 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 HABP2Q14520 560 aaPredicted RBP9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 NHLRC3Q5JS37 347 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 RPL22L1Q6P5R6 122 aaKnown RBP9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 SLC16A12Q6ZSM3 486 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 LINC00596Q86U02 117 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 OR52I1Q8NGK6 324 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 OR9G1Q8NH87 305 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 GPR148Q8TDV2 347 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 STMN2Q93045 179 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 RBM14Q96PK6 669 aaKnown RBP9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 PDCD1LG2Q9BQ51 273 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 BARHL1Q9BZE3 327 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 MMP28Q9H239 520 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 IFT22Q9H7X7 185 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 S100A14Q9HCY8 104 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 FGF20Q9NP95 211 aaPredicted RBP9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 C8orf4Q9NR00 106 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 FAM118AQ9NWS6 357 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms