RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ADARB2-AS1A8MUL3 147 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 FAM90A22PA8MWA6 464 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 TOR1AO14656 332 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 CASQ2O14958 399 aaPredicted RBP12.22□□□□□ -0.45
LIMS3-203ENST00000480744 TMEM225BP0DP42 221 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 BRS3P32247 399 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 GDNFP39905 211 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 ARHGDIBP52566 201 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 ALKBH1Q13686 389 aaKnown RBP12.22□□□□□ -0.45
LIMS3-203ENST00000480744 ATXN7L3Q14CW9 347 aaPredicted RBP12.22□□□□□ -0.45
LIMS3-203ENST00000480744 SLC25A30Q5SVS4 291 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 OGFRL1Q5TC84 451 aaPredicted RBP12.22□□□□□ -0.45
LIMS3-203ENST00000480744 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 RTN4RL2Q86UN3 420 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 LHFPL3Q86UP9 236 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 WIPF2Q8TF74 440 aaPredicted RBP12.22□□□□□ -0.45
LIMS3-203ENST00000480744 SGCDQ92629 289 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 LGALS12Q96DT0 336 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 ALG8Q9BVK2 526 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 COMMD4Q9H0A8 199 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 ZCCHC4Q9H5U6 513 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 GMPPBQ9Y5P6 360 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 ODAMA1E959 279 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 LEUTXA8MZ59 168 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 DEGS1O15121 323 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 PTGFRP43088 359 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 BDH1Q02338 343 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 RBM39Q14498 530 aaKnown RBP12.21□□□□□ -0.45
LIMS3-203ENST00000480744 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 SAXO1Q8IYX7 474 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 OR5AU1Q8NGC0 362 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 OR4D6Q8NGJ1 314 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 TSEN15Q8WW01 171 aaKnown RBP12.21□□□□□ -0.45
LIMS3-203ENST00000480744 AKR1E2Q96JD6 320 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 OCSTAMPQ9BR26 566 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 SLC25A33Q9BSK2 321 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 ZNF286AQ9HBT8 521 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 SMPD3Q9NY59 655 aaPredicted RBP12.21□□□□□ -0.45
LIMS3-203ENST00000480744 TAS2R3Q9NYW6 316 aa12.21□□□□□ -0.45
LIMS3-203ENST00000480744 EXOGQ9Y2C4 368 aaKnown RBP12.21□□□□□ -0.45
LIMS3-203ENST00000480744 LOC100130705A0A1B0GUX0 176 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 SLC33A1O00400 549 aaPredicted RBP12.2□□□□□ -0.46
LIMS3-203ENST00000480744 HSPB6O14558 160 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 PIN1P1O15428 100 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 CLIC3O95833 236 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 MT-ND2P03891 347 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 NFYBP25208 207 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 LMO1P25800 156 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 GALEQ14376 348 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 FBLN7Q53RD9 439 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 Q6P435 159 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 Q6ZPA2 131 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 C16orf82Q7Z2V1 217 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 REC114Q7Z4M0 266 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
LIMS3-203ENST00000480744 CHST4Q8NCG5 386 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 MRAPQ8TCY5 172 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 APH1BQ8WW43 257 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 NRG4Q8WWG1 115 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 CORO2AQ92828 525 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 COQ2Q96H96 371 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 NR1H4Q96RI1 486 aaPredicted RBP12.2□□□□□ -0.46
LIMS3-203ENST00000480744 MYCBPQ99417 103 aaPredicted RBP12.2□□□□□ -0.46
LIMS3-203ENST00000480744 DCLRE1BQ9H816 532 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 ISG20L2Q9H9L3 353 aaKnown RBP12.2□□□□□ -0.46
LIMS3-203ENST00000480744 LIN7BQ9HAP6 207 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 MYRFQ9Y2G1 1151 aa12.2□□□□□ -0.46
LIMS3-203ENST00000480744 SH2D7A6NKC9 451 aaPredicted RBP12.19□□□□□ -0.46
LIMS3-203ENST00000480744 SULT1B1O43704 296 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 IGLV1-47P01700 117 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 LPLP06858 475 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 PF4V1P10720 104 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 DBTP11182 482 aaKnown RBP12.19□□□□□ -0.46
LIMS3-203ENST00000480744 CD33P20138 364 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 CEACAM3P40198 252 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 GLP1RP43220 463 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 OR3A4PP47883 348 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 KISS1Q15726 138 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 ABCA11PQ4W5N1 156 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 C9orf152Q5JTZ5 239 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 ZNF691Q5VV52 312 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 PACRGLQ8N7B6 248 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 OR5D14Q8NGL3 314 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 RDH12Q96NR8 316 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 PDCD1LG2Q9BQ51 273 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 PPIL3Q9H2H8 161 aaKnown RBP12.19□□□□□ -0.46
LIMS3-203ENST00000480744 RHOFQ9HBH0 211 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 AMBNQ9NP70 447 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 DHDHQ9UQ10 334 aa12.19□□□□□ -0.46
LIMS3-203ENST00000480744 TCRBV4S1A1TA0A5B7 111 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 TMEM212A6NML5 194 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 ZNF729A6NN14 1252 aaPredicted RBP12.18□□□□□ -0.46
LIMS3-203ENST00000480744 E9PI62 339 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 H0YJX3 145 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 BUB1B-PAK6H3BSN5 160 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 OR2F2O95006 317 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 ZFPL1O95159 310 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 FADS2O95864 444 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms