RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GPR157Q5UAW9 335 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 METTL11BQ5VVY1 283 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 LAIR2Q6ISS4 152 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 HAGHLQ6PII5 290 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-213ENST00000480102 RBMS3Q6XE24 437 aaKnown RBP4.02□□□□□ -1.77
PTCD3-213ENST00000480102 BTN2A1Q7KYR7 527 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 PRSS48Q7RTY5 328 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 LHFPL3Q86UP9 236 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 COMMD2Q86X83 199 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 LYPD6Q86Y78 171 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 OR8H2Q8N162 312 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF676Q8N7Q3 588 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 NANOGP1Q8N7R0 232 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 OR11H6Q8NGC7 330 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 OR10A7Q8NGE5 316 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 GGHQ92820 318 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 CORO2AQ92828 525 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 RPL3LQ92901 407 aaKnown RBP4.02□□□□□ -1.77
PTCD3-213ENST00000480102 MYDGFQ969H8 173 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 ADAT3Q96EY9 351 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-213ENST00000480102 SNX22Q96L94 193 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 PGLYRP3Q96LB9 341 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 OPALINQ96PE5 141 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 GAFA1Q96PS6 74 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 UQCC2Q9BRT2 126 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 WDR12Q9GZL7 423 aaKnown RBP4.02□□□□□ -1.77
PTCD3-213ENST00000480102 SPACA1Q9HBV2 294 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 LPAR2Q9HBW0 351 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 HMG20AQ9NP66 347 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 TMEM138Q9NPI0 162 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 UFSP2Q9NUQ7 469 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 SCN3BQ9NY72 215 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 MTCH1Q9NZJ7 389 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 DNAJB11Q9UBS4 358 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 SLC25A10Q9UBX3 287 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-213ENST00000480102 GLS2Q9UI32 602 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 BLOC1S6Q9UL45 172 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 DHDHQ9UQ10 334 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 ERGIC3Q9Y282 383 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 TPRKBQ9Y3C4 175 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 MAB21L2Q9Y586 359 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 LINC00312Q9Y6C7 94 aa4.02□□□□□ -1.77
PTCD3-213ENST00000480102 CUBNO60494 3623 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 IGKV1-27A0A075B6S5 117 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 TRBV5-7A0A0A0MS05 114 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 IGHV1-69DA0A0B4J2H0 117 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 hADV38S2A0JD32 116 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 RFPL4AA6NLU0 287 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 RFPL4AL1F8VTS6 287 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 J3QLW9 94 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 MGST3O14880 152 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 DENRO43583 198 aaKnown RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 FCN3O75636 299 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 RHBDL1O75783 438 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 RPP14O95059 124 aaKnown RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 SCAF4O95104 1147 aaKnown RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 NXPH2O95156 264 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 IGHV1-69P01742 117 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 GYPAP02724 150 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 CDK1P06493 297 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 GNAO1P09471 354 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 OCM2P0CE71 109 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 UBBP0CG47 229 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF19P17023 458 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 IGFBP3P17936 291 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 RAB3AP20336 220 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 CD34P28906 385 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 ETV1P50549 477 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 FGF12P61328 243 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 RPS11P62280 158 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 TPBGQ13641 420 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 KISS1Q15726 138 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 TBCEQ15813 527 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 CEP78Q5JTW2 689 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 RBM48Q5RL73 367 aaKnown RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 C11orf88Q6PI97 169 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 LYPD2Q6UXB3 125 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 UNQ9370/PRO34162Q6UXP9 181 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 HEPN1Q6WQI6 88 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF826PQ6ZT77 177 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 MOB3CQ70IA8 216 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 Q71RC1 249 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 FAM58AQ8N1B3 248 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 GAPTQ8N292 157 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 C11orf42Q8N5U0 333 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 OR2C3Q8N628 320 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 C8orf31Q8N9H6 132 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 OR5R1Q8NH85 324 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 SSMEM1Q8WWF3 244 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 GHSRQ92847 366 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 TMEM106AQ96A25 262 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 CREB3L1Q96BA8 519 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 FGGYQ96C11 551 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 TBX15Q96SF7 602 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 TBX5Q99593 518 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 MND1Q9BWT6 205 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 WDR13Q9H1Z4 485 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 METTL17Q9H7H0 456 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-213ENST00000480102 HEXA-AS1Q9H8Q6 139 aa4.01□□□□□ -1.77
PTCD3-213ENST00000480102 ISG20L2Q9H9L3 353 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms