RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ABCB9Q9NP78 766 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 TRIM36Q9NQ86 728 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 ZFP57Q9NU63 452 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 BEX4Q9NWD9 120 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 NDUFB11Q9NX14 153 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 FAM206AQ9NX38 181 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 ST6GALNAC2Q9UJ37 374 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 OR52A1Q9UKL2 312 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 FZR1Q9UM11 496 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 CARHSP1Q9Y2V2 147 aaKnown RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 CHTOPQ9Y3Y2 248 aaKnown RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 DSCAMO60469 2012 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 IGLV3-9A0A075B6K5 115 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 TRBV2A0A0J9YWF9 115 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 TMEM212A6NML5 194 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 IQCF6A8MYZ5 107 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 L7N2F9 121 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 RAB27BO00194 218 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 NDUFS8O00217 210 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 NUPL2O15504 423 aaKnown RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 EIF3GO75821 320 aaKnown RBP eCLIP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 ATG12O94817 140 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 SOD3P08294 240 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 GIPP09681 153 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 DANCRP0C864 163 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 SLC2A2P11168 524 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 MPV17P39210 176 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF81P51508 661 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 CCR9P51686 369 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 CAPZA1P52907 286 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF92Q03936 586 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 PSG7Q13046 419 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 ALKBH1Q13686 389 aaKnown RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 GK2Q14410 553 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 SMCO1Q147U7 214 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 MED22Q15528 200 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 RSPO1Q2MKA7 263 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 TMEM95Q3KNT9 176 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 PCGF3Q3KNV8 242 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF684Q5T5D7 378 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 OR2T2Q6IF00 324 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 MZT2AQ6P582 158 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 RPL22L1Q6P5R6 122 aaKnown RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 FAM131AQ6UXB0 335 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 NAA40Q86UY6 237 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF575Q86XF7 245 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 CATSPERDQ86XM0 798 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 KLBQ86Z14 1044 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 SEMA6DQ8NFY4 1073 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 OR8G5Q8NG78 346 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 OR13G1Q8NGZ3 307 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 OR5AK2Q8NH90 309 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 OR2AE1Q8NHA4 323 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 OR51E1Q8TCB6 317 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 TCTEX1D2Q8WW35 142 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 NEU4Q8WWR8 484 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 PELI1Q96FA3 418 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 HIST1H2AAQ96QV6 131 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 SSBP3Q9BWW4 388 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-209ENST00000479532 CACNG6Q9BXT2 260 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 TMEM138Q9NPI0 162 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 DECR2Q9NUI1 292 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 TMEM100Q9NV29 134 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 NKIRAS2Q9NYR9 191 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 MIOXQ9UGB7 285 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 PRR14LQ5THK1 2151 aa5.25□□□□□ -1.57
SF3B1-209ENST00000479532 SPTAN1Q13813 2472 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 USP9YO00507 2555 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF816-ZNF321PA0A0X1KG74 233 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 LOC102723971A0A1B0GUV8 181 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 hCG_38984A0A1B0GV85 526 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 A0A1W2PPR1 153 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ANKRD61A6NGH8 418 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 TMEM210A6NLX4 147 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ANXA2P2A6NMY6 339 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 DHRS7CA6NNS2 312 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 CD300LBA8K4G0 201 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 C17orf100A8MU93 164 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 PRR32B1ATL7 298 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 H7C417 338 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 P2RY10O00398 339 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 MAGEB4O15481 346 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 SYT7O43581 403 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 NDUFS6O75380 124 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 SRSF10O75494 262 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 RP2O75695 350 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 DHRS3O75911 302 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 SERPINA3P01011 423 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 TTRP02766 147 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 CSTBP04080 98 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 RLN2P04090 185 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ISG15P05161 165 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 FCER2P06734 321 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ADRA2AP08913 450 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 LINC00614P0C842 121 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 LIMS3P0CW19 117 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 LIMS4P0CW20 117 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 RAB3BP20337 219 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 C21orf33P30042 268 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 FGF9P31371 208 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms