RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZNF98A6NK75 572 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 GNRHRP30968 328 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 RAB5BP61020 215 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 EWSR1Q01844 656 aaKnown RBP eCLIP21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 OR2C3Q8N628 320 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 NAXEQ8NCW5 288 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 OR8G5Q8NG78 346 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 ZPBPQ9BS86 351 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 P4HTMQ9NXG6 502 aa21.19■□□□□ 0.98
SYNGAP1-206ENST00000479510 KIR2DS1A0A191URI9 304 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 CLEC18AA5D8T8 446 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 NME2P1O60361 137 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 MMP9P14780 707 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 KIR2DS4P43632 304 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 NPBWR2P48146 333 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 KIR2DS1Q14954 304 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 CLEC18CQ8NCF0 446 aa21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 GTF3AQ92664 365 aaKnown RBP21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 ZNF845Q96IR2 970 aaPredicted RBP21.18■□□□□ 0.98
SYNGAP1-206ENST00000479510 PIGBOS1A0A0B4J2F0 54 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 PITX3O75364 302 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 PRH1P02810 166 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 NHLH2Q02577 135 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 CEACAM21Q3KPI0 293 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 CLEC9AQ6UXN8 241 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 ZNF565Q8N9K5 539 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 OR56B2PQ8NGI1 322 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 PAPOLGQ9BWT3 736 aaKnown RBP21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 SLC25A31Q9H0C2 315 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 RIMS4Q9H426 269 aaPredicted RBP21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 UBE2J1Q9Y385 318 aaPredicted RBP21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 PATE3B3GLJ2 98 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 UMAD1C9J7I0 102 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 NKX2-1P43699 371 aaPredicted RBP21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 RPS18P62269 152 aaKnown RBP21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 PRDX4Q13162 271 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 IGSF11Q5DX21 431 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 MEX3BQ6ZN04 569 aaKnown RBP21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 ZNF695Q8IW36 515 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 OPA3Q9H6K4 179 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 SLC7A10Q9NS82 523 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 COA4Q9NYJ1 87 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 SDK2Q58EX2 2172 aa21.17■□□□□ 0.98
SYNGAP1-206ENST00000479510 NKX2-6A6NCS4 301 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 K7N7A8 449 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 TUSC2O75896 110 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 ACP1P24666 158 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 AKR1D1P51857 326 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 ARF1P84077 181 aaKnown RBP21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 LINC00596Q86U02 117 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 MKXQ8IYA7 352 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 ZDHHC23Q8IYP9 409 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 CT55Q8WUE5 264 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 APOBEC3DQ96AK3 386 aaPredicted RBP21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 PLEKHF2Q9H8W4 249 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 NCKAP5O14513 1909 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 PINLYPA6NC86 204 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 MT-ND4LP03901 98 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 PDCD1Q15116 288 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 SLC23A3Q6PIS1 610 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 TBC1D26Q86UD7 250 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 SLC39A7Q92504 469 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 IL22RA2Q969J5 263 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 USB1Q9BQ65 265 aaKnown RBP21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 FAM173AQ9BQD7 235 aa21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 EIF5A2Q9GZV4 153 aaKnown RBP21.16■□□□□ 0.98
SYNGAP1-206ENST00000479510 GLI4P10075 376 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 BCL3P20749 454 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 PTAFRP25105 342 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 SELENOHQ8IZQ5 122 aaKnown RBP21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 PSMF1Q92530 271 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 C14orf79Q96F83 325 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 TAAR9Q96RI9 348 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 PARP12Q9H0J9 701 aaKnown RBP21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 SLC35B3Q9H1N7 401 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 PLK3Q9H4B4 646 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 ESRP2Q9H6T0 727 aaKnown RBP21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 B4GALT7Q9UBV7 327 aa21.15■□□□□ 0.98
SYNGAP1-206ENST00000479510 SS18L1O75177 396 aaPredicted RBP21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 RPL35P42766 123 aaKnown RBP21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 RHEBQ15382 184 aa21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 MRPL21Q7Z2W9 205 aaKnown RBP21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 SH3BGRL3Q9H299 93 aa21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 SPACA1Q9HBV2 294 aa21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 RPS10P5Q9NQ39 176 aa21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 LYRM2Q9NU23 88 aaPredicted RBP21.14■□□□□ 0.98
SYNGAP1-206ENST00000479510 BTBD17A6NE02 478 aa21.14■□□□□ 0.97
SYNGAP1-206ENST00000479510 UCP1P25874 307 aa21.14■□□□□ 0.97
SYNGAP1-206ENST00000479510 HSD17B11Q8NBQ5 300 aa21.14■□□□□ 0.97
SYNGAP1-206ENST00000479510 CLCC1Q96S66 551 aa21.14■□□□□ 0.97
SYNGAP1-206ENST00000479510 C7orf77A4D0Y5 90 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 C1orf196B1AJZ1 125 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 AWAT1Q58HT5 328 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 OR5A2Q8NGI9 324 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 HIST1H2BAQ96A08 127 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 SLAMF9Q96A28 289 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 LRFN1Q9P244 771 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 LOXL2Q9Y4K0 774 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 ATP23Q9Y6H3 246 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms