RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ADRA2AP08913 450 aa12.58□□□□□ -0.4
COL20A1-206ENST00000479501 RAB5AP20339 215 aa12.58□□□□□ -0.4
COL20A1-206ENST00000479501 HNF1AP20823 631 aa12.58□□□□□ -0.4
COL20A1-206ENST00000479501 SLC25A42Q86VD7 318 aa12.58□□□□□ -0.4
COL20A1-206ENST00000479501 WDR13Q9H1Z4 485 aa12.58□□□□□ -0.4
COL20A1-206ENST00000479501 GPR35Q9HC97 309 aa12.58□□□□□ -0.4
COL20A1-206ENST00000479501 POMT1Q9Y6A1 747 aa12.58□□□□□ -0.4
COL20A1-206ENST00000479501 A0A087X0M5 115 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 IGHV1-45A0A0A0MS14 117 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 A0A1B0GX30 115 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 C7orf77A4D0Y5 90 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 PGA4P0DJD7 388 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 PGA3P0DJD8 388 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 MICBQ29980 383 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 FAM27BQ5VT28 67 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 LINC00114Q6XXX2 140 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 Q8IYB0 196 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 KLHDC1Q8N7A1 406 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 APCDD1LQ8NCL9 501 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 LRRC30A6NM36 301 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 CDK2AP1O14519 115 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 LIMK1P53667 647 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 TMEM33P57088 247 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 DCAF10Q5QP82 559 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 PRAMEF5Q5TYX0 476 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 PRAMEF6Q5VXH4 476 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 ALX4Q9H161 411 aaPredicted RBP12.57□□□□□ -0.4
COL20A1-206ENST00000479501 TMED3Q9Y3Q3 217 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 GPR179Q6PRD1 2367 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 MKRN2OSH3BPM6 223 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 GABRA4P48169 554 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 RANP62826 216 aaKnown RBP12.57□□□□□ -0.4
COL20A1-206ENST00000479501 ZXDAP98168 799 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 ZNRF4Q8WWF5 429 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 ADAT1Q9BUB4 502 aaKnown RBP12.57□□□□□ -0.4
COL20A1-206ENST00000479501 MED12Q93074 2177 aa12.57□□□□□ -0.4
COL20A1-206ENST00000479501 MASP2O00187 686 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 ISG15P05161 165 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 SLC25A4P12235 298 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 SURF2Q15527 256 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-206ENST00000479501 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 UBALD1Q8TB05 177 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 SLC35D1Q9NTN3 355 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 DECR2Q9NUI1 292 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 M0R1B8 84 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 ACOT6Q3I5F7 207 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-206ENST00000479501 PLAC9Q5JTB6 97 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 ZNF468Q5VIY5 522 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-206ENST00000479501 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 CA10Q9NS85 328 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 MTCH1Q9NZJ7 389 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 LPAR3Q9UBY5 353 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 LY86O95711 162 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 NDUFB7P17568 137 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 SHARPINQ9H0F6 387 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 OR5B21A6NL26 309 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 C3AR1Q16581 482 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 C1orf100Q5SVJ3 147 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 OR2M7Q8NG81 312 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 H1FXQ92522 213 aaKnown RBP12.56□□□□□ -0.4
COL20A1-206ENST00000479501 GALMQ96C23 342 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 VAMP8Q9BV40 100 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 NAA60Q9H7X0 242 aa12.56□□□□□ -0.4
COL20A1-206ENST00000479501 CLEC18AA5D8T8 446 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 NKX6-3A6NJ46 265 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 DVL1O14640 695 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 GEMIN2O14893 280 aaKnown RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 LYZL6O75951 148 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 DTYMKP23919 212 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 AGFG1P52594 562 aaKnown RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 FDX2Q6P4F2 183 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 CLEC18CQ8NCF0 446 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 OR5B3Q8NH48 314 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 NTNG2Q96CW9 530 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 EGLN1Q9GZT9 426 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 PARD6AQ9NPB6 346 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 TRAF3IP2O43734 574 aaPredicted RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 GPR12P47775 334 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 TMEM104Q8NE00 496 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 AMDHD2Q9Y303 409 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 MPC1Q9Y5U8 109 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 MYLKQ15746 1914 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 LMX1BO60663 402 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 ONECUT2O95948 504 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 CFDP00746 253 aaPredicted RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 CTSDP07339 412 aaPredicted RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 TPPP2P59282 170 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 RGS7BPQ6MZT1 257 aaPredicted RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 OR5C1Q8NGR4 320 aa12.55□□□□□ -0.4
COL20A1-206ENST00000479501 PINX1Q96BK5 328 aaKnown RBP12.55□□□□□ -0.4
COL20A1-206ENST00000479501 RASL12Q9NYN1 266 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms