RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PIGYQ3MUY2 71 aa16.83■□□□□ 0.28
VARS-224ENST00000479051 TMEM91Q6ZNR0 172 aa16.83■□□□□ 0.28
VARS-224ENST00000479051 LRRTM1Q86UE6 522 aa16.83■□□□□ 0.28
VARS-224ENST00000479051 MRPS24Q96EL2 167 aaKnown RBP16.83■□□□□ 0.28
VARS-224ENST00000479051 UNKLQ9H9P5 680 aaKnown RBP16.83■□□□□ 0.28
VARS-224ENST00000479051 SLC33A1O00400 549 aaPredicted RBP16.82■□□□□ 0.28
VARS-224ENST00000479051 CSN2P05814 226 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 UBBP0CG47 229 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 RANBP1P43487 201 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 GP2P55259 537 aaKnown RBP16.82■□□□□ 0.28
VARS-224ENST00000479051 P2RX3P56373 397 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 FABP5Q01469 135 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 SSX1Q16384 188 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 MPV17LQ2QL34 196 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 PAN3Q58A45 887 aaKnown RBP16.82■□□□□ 0.28
VARS-224ENST00000479051 BRD3OSQ6XYD6 125 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 Q8N7P7 452 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 OR4D6Q8NGJ1 314 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 PPA2Q9H2U2 334 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 LINC00312Q9Y6C7 94 aa16.82■□□□□ 0.28
VARS-224ENST00000479051 OR7C1O76099 320 aaPredicted RBP16.81■□□□□ 0.28
VARS-224ENST00000479051 TNFAIP8O95379 198 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 CALRP27797 417 aaKnown RBP16.81■□□□□ 0.28
VARS-224ENST00000479051 HILS1P60008 231 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 ERVFRD-1P60508 538 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 ZNF273Q14593 569 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 TRAPPC6BQ86SZ2 158 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 TMEM158Q8WZ71 300 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 ZNF714Q96N38 554 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 CST11Q9H112 138 aa16.81■□□□□ 0.28
VARS-224ENST00000479051 PPIL3Q9H2H8 161 aaKnown RBP16.81■□□□□ 0.28
VARS-224ENST00000479051 RBP4P02753 201 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 ZNF728P0DKX0 622 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 CCL3L1P16619 93 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 GALP22466 123 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 KCNJ3P48549 501 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 PSMD7P51665 324 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 KRBOX4Q5JUW0 171 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 RUSC1-AS1Q66K80 236 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 LYPD6Q86Y78 171 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 PDZD9Q8IXQ8 264 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 BCL6BQ8N143 479 aaPredicted RBP16.8■□□□□ 0.28
VARS-224ENST00000479051 TPRX1Q8N7U7 411 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 SIGLECL1Q8N7X8 197 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 ZDHHC16Q969W1 377 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 BARHL1Q9BZE3 327 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 IFT22Q9H7X7 185 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 HEXA-AS1Q9H8Q6 139 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 SPACA1Q9HBV2 294 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 VCX3AQ9NNX9 186 aa16.8■□□□□ 0.28
VARS-224ENST00000479051 UBE2J1Q9Y385 318 aaPredicted RBP16.8■□□□□ 0.28
VARS-224ENST00000479051 TRGV10A0A0A0MS01 117 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 H3BUI4 141 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 HSPB6O14558 160 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 GEMIN2O14893 280 aaKnown RBP16.79■□□□□ 0.28
VARS-224ENST00000479051 CRTAPO75718 401 aaPredicted RBP16.79■□□□□ 0.28
VARS-224ENST00000479051 MYL9P24844 172 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 UBE2E1P51965 193 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 AESQ08117 197 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 ATXN7L3Q14CW9 347 aaPredicted RBP16.79■□□□□ 0.28
VARS-224ENST00000479051 C1orf100Q5SVJ3 147 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 OR6M1Q8NGM8 313 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 PLGRKTQ9HBL7 147 aa16.79■□□□□ 0.28
VARS-224ENST00000479051 TRAV24A0A0B4J272 114 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 TRDV1A0A1B0GX56 115 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 RNF212BA8MTL3 300 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 C17orf98A8MV24 154 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 RNASEK-C17orf49H0YIS7 233 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 TRIM77I1YAP6 450 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 PDCD5O14737 125 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 MGMTP16455 207 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 HTR2CP28335 458 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 NEDD8Q15843 81 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 ATAD3CQ5T2N8 411 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 CD200R1LQ6Q8B3 271 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 TNFRSF14Q92956 283 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 DPCDQ9BVM2 203 aaPredicted RBP16.78■□□□□ 0.28
VARS-224ENST00000479051 GAL3ST2Q9H3Q3 398 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 ING3Q9NXR8 418 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 OR6C3Q9NZP0 311 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 FAM96BQ9Y3D0 163 aa16.78■□□□□ 0.28
VARS-224ENST00000479051 A0A087WXM4 84 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 A0A1W2PP11 408 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 ODAMA1E959 279 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A10PA6NDY2 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A18PA6NE21 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A16PA6NEW6 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A20PA6NIJ5 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A8PA6NJQ4 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A7PA6NKC0 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A22PA8MWA6 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A12PA8MX19 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A5PA8MXJ8 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A23PA8MXZ1 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 VENTXO95231 258 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A15PP0C7V4 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A13PP0C7W8 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A14PP0C7W9 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 FAM90A24PP0C7X0 464 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 GLIPR1P48060 266 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms