RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 OR2J2O76002 312 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 C1QL2Q7Z5L3 287 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 ZNF552Q9H707 407 aaPredicted RBP18.45■□□□□ 0.54
SDF4-206ENST00000478938 RPH3ALQ9UNE2 315 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 HEBP2Q9Y5Z4 205 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 HTTP42858 3142 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 SHISA7A6NL88 538 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 PHF1O43189 567 aaPredicted RBP18.45■□□□□ 0.54
SDF4-206ENST00000478938 ZNF726P1Q15940 193 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 SLC25A24Q6NUK1 477 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 C6orf201Q7Z4U5 140 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 ZNF709Q8N972 641 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 OR2A5Q96R48 311 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 RPRMQ9NS64 109 aa18.45■□□□□ 0.54
SDF4-206ENST00000478938 LYRM2Q9NU23 88 aaPredicted RBP18.45■□□□□ 0.54
SDF4-206ENST00000478938 GRIFINA4D1Z8 144 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 TMEM238C9JI98 176 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 MSTNO14793 375 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 PRNPP04156 253 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 MTCP1P56278 107 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 PRDX4Q13162 271 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 AGBL4Q5VU57 503 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 LRTM2Q8N967 370 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 HSPB9Q9BQS6 159 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 TAS2R30P59541 319 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 C16orf54Q6UWD8 224 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 SLC24A4Q8NFF2 622 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 PGAM5Q96HS1 289 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 TBL1XR1Q9BZK7 514 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 HIPK2Q9H2X6 1198 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 SLC2A9Q9NRM0 540 aa18.44■□□□□ 0.54
SDF4-206ENST00000478938 C17orf51A8MQB3 221 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 CIDEAO60543 219 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 CDS2O95674 445 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 TMEM50AO95807 157 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 TOMM40O96008 361 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 CYBAP13498 195 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 TCN2P20062 427 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 NKX2-1P43699 371 aaPredicted RBP18.43■□□□□ 0.54
SDF4-206ENST00000478938 FAM57BQ71RH2 274 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 OR4C5Q8NGB2 326 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 IMMP2LQ96T52 175 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 DECR2Q9NUI1 292 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 TRAPPC1Q9Y5R8 145 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 TRAV39A0A0B4J263 110 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 EFEMP2O95967 443 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 TYMSP04818 313 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 CT45A8P0DMV1 189 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 CT45A9P0DMV2 189 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 ANOS1P23352 680 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 CT45A2Q5DJT8 189 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 CXorf66Q5JRM2 361 aaPredicted RBP18.43■□□□□ 0.54
SDF4-206ENST00000478938 CENPVQ7Z7K6 275 aaPredicted RBP18.43■□□□□ 0.54
SDF4-206ENST00000478938 TM4SF19Q96DZ7 209 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 ZNF845Q96IR2 970 aaPredicted RBP18.43■□□□□ 0.54
SDF4-206ENST00000478938 LYRM4Q9HD34 91 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 FAM60AQ9NP50 221 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 SPACA6W5XKT8 324 aa18.43■□□□□ 0.54
SDF4-206ENST00000478938 PHF3Q92576 2039 aaKnown RBP18.42■□□□□ 0.54
SDF4-206ENST00000478938 TRAV34A0A0B4J273 112 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 A0A1W2PNV4 684 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 IGLON5A6NGN9 336 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 FOXI3A8MTJ6 420 aaPredicted RBP18.42■□□□□ 0.54
SDF4-206ENST00000478938 IL3RAP26951 378 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 RRADP55042 308 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 UBE2NP61088 152 aaKnown RBP18.42■□□□□ 0.54
SDF4-206ENST00000478938 FAM89BQ8N5H3 189 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 RSG1Q9BU20 258 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 FBRSQ9HAH7 460 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 MBNL1Q9NR56 388 aaKnown RBP18.42■□□□□ 0.54
SDF4-206ENST00000478938 CTGFP29279 349 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 MLF1P58340 268 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 RPL15P61313 204 aaKnown RBP18.42■□□□□ 0.54
SDF4-206ENST00000478938 MESP2Q0VG99 397 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 ARL6IP1Q15041 203 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 TMEM41BQ5BJD5 291 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 TCEAL8Q8IYN2 117 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 P2RX4Q99571 388 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 ZNF160Q9HCG1 818 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 LAMTOR2Q9Y2Q5 125 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 INSL6Q9Y581 213 aa18.42■□□□□ 0.54
SDF4-206ENST00000478938 COMPP49747 757 aaPredicted RBP18.41■□□□□ 0.54
SDF4-206ENST00000478938 LINC01551Q86U37 167 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 PLPPR1Q8TBJ4 325 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 SEPSECSQ9HD40 501 aaKnown RBP18.41■□□□□ 0.54
SDF4-206ENST00000478938 ANXA10Q9UJ72 324 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 WNT6Q9Y6F9 365 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 COX11Q9Y6N1 276 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 ZNF850A8MQ14 1090 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 OPRM1P35372 400 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 EXT1Q16394 746 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 OR5T1Q8NG75 326 aa18.41■□□□□ 0.54
SDF4-206ENST00000478938 FAM71F1Q96KD3 344 aaPredicted RBP18.41■□□□□ 0.54
SDF4-206ENST00000478938 PATZ1Q9HBE1 687 aaKnown RBP18.41■□□□□ 0.54
SDF4-206ENST00000478938 IGKV1D-43A0A0B4J1Z2 117 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 KBTBD11O94819 623 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 TCTN1Q2MV58 587 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 FBLN7Q53RD9 439 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 CSTL1Q9H114 145 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms