RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 PPA2Q9H2U2 334 aa11.16□□□□□ -0.62
LMNA-214ENST00000478063 LIME1Q9H400 295 aa11.16□□□□□ -0.62
LMNA-214ENST00000478063 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
LMNA-214ENST00000478063 ARID1AO14497 2285 aa11.16□□□□□ -0.62
LMNA-214ENST00000478063 NKX6-3A6NJ46 265 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 SULT1C2O00338 296 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 UPK1BO75841 260 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 MELTFP08582 738 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 BTG1P62324 171 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 RBM39Q14498 530 aaKnown RBP11.15□□□□□ -0.62
LMNA-214ENST00000478063 CD177Q8N6Q3 437 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 ANGPTL6Q8NI99 470 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 GPX8Q8TED1 209 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 CMSS1Q9BQ75 279 aaKnown RBP11.15□□□□□ -0.62
LMNA-214ENST00000478063 HDHD3Q9BSH5 251 aaPredicted RBP11.15□□□□□ -0.62
LMNA-214ENST00000478063 CHST6Q9GZX3 395 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 MYOZ1Q9NP98 299 aaPredicted RBP11.15□□□□□ -0.62
LMNA-214ENST00000478063 IFT46Q9NQC8 304 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 ETAA1Q9NY74 926 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 METRNQ9UJH8 293 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 ZNF222Q9UK12 451 aa11.15□□□□□ -0.62
LMNA-214ENST00000478063 YLPM1P49750 1951 aaKnown RBP11.15□□□□□ -0.62
LMNA-214ENST00000478063 A0A1W2PQ09 198 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 ISPDA4D126 451 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 PPIHO43447 177 aaKnown RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 LANCL1O43813 399 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 SSX5O60225 188 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 CA11O75493 328 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 RBBP9O75884 186 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 GLAP06280 429 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 FCER2P06734 321 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 LMO1P25800 156 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 GDNFP39905 211 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 MDH2P40926 338 aaKnown RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 ATXN7L3Q14CW9 347 aaPredicted RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 ZMYND11Q15326 602 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 AVPI1Q5T686 147 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 ZNF57Q68EA5 555 aaPredicted RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 DCDC5Q6ZRR9 648 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 TIMD4Q96H15 378 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 CCL13Q99616 98 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 ZNF665Q9H7R5 613 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 CHODLQ9H9P2 273 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 SEBOXQ9HB31 216 aaPredicted RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 CHMP1AQ9HD42 196 aaPredicted RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 PALMDQ9NP74 551 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 C12orf4Q9NQ89 552 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 ZNF701Q9NV72 531 aaPredicted RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 ING3Q9NXR8 418 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 KLK11Q9UBX7 282 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 PTPN13Q12923 2485 aa11.14□□□□□ -0.63
LMNA-214ENST00000478063 ANKRD17O75179 2603 aaKnown RBP11.14□□□□□ -0.63
LMNA-214ENST00000478063 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 TMEM82A0PJX8 343 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 PSPNO60542 156 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 CBX5P45973 191 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 OR3A1P47881 315 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 KRTAP10-9P60411 292 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 ACTBP60709 375 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 ACTG1P63261 375 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 KCNJ8Q15842 424 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 DNM1P46Q6ZS02 220 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 TMEM185AQ8NFB2 350 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 OR4S1Q8NGB4 309 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 PPP1R35Q8TAP8 253 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 PLPPR1Q8TBJ4 325 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 ZFAND2BQ8WV99 257 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 RAB1CQ92928 201 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 GAFA1Q96PS6 74 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 MTFP1Q9UDX5 166 aa11.13□□□□□ -0.63
LMNA-214ENST00000478063 A0A1B0GW55 424 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 TMPRSS2O15393 492 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 ADAM20O43506 726 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 ORC5O43913 435 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 SSX4O60224 188 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 ZNF737O75373 536 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 IGHV2-70P01814 119 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 DUX4L2P0CJ85 424 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 DUX4L3P0CJ86 424 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 DUX4L4P0CJ87 422 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 DUX4L5P0CJ88 424 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 DUX4L6P0CJ89 424 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 DUX4L7P0CJ90 424 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 SELLP14151 372 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 AMY2BP19961 511 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 RCVRNP35243 200 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 ATP5J2P56134 94 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 IL13RA1P78552 427 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 IFITM3Q01628 133 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 SSBP1Q04837 148 aaKnown RBP11.12□□□□□ -0.63
LMNA-214ENST00000478063 GRK1Q15835 563 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 SHEQ5VZ18 495 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 DUX4L9Q6RFH8 374 aaPredicted RBP11.12□□□□□ -0.63
LMNA-214ENST00000478063 ZNF788Q6ZQV5 615 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 C17orf107Q6ZR85 190 aa11.12□□□□□ -0.63
LMNA-214ENST00000478063 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms