RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TSSK3Q96PN8 268 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 S1PR3Q99500 378 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 CCT7Q99832 543 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 EMC6Q9BV81 110 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 C12orf10Q9HB07 376 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 CCNB1IP1Q9NPC3 277 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 VNN3Q9NY84 501 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 GUCA1BQ9UMX6 200 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 POLR3HQ9Y535 204 aaPredicted RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 DNAH2Q9P225 4427 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 A0A087WUJ7 227 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 NUPR2A6NF83 97 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 FAM159BA6NKW6 160 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 CENPBD1B2RD01 187 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 E7ESA3 106 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 NDUFB3O43676 98 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 GMNNO75496 209 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 RHBDL1O75783 438 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 SUPT7LO94864 414 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 SERPINE1P05121 402 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 DBIP07108 87 aaKnown RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 GIG44P09565 113 aaPredicted RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 HSD17B1P14061 328 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 GRPRP30550 384 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 GGT2P36268 569 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 HTR5AP47898 357 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 DYNLT3P51808 116 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 PCBD1P61457 104 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 HPCAP84074 193 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 PUDPQ08623 228 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 NAB1Q13506 487 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 OR8B8Q15620 311 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 UAP1Q16222 522 aaPredicted RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 KCTD19Q17RG1 926 aaPredicted RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 RSBN1Q5VWQ0 802 aaPredicted RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 ANKRD26P1Q6NSI1 321 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 PLBD1Q6P4A8 553 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 WDR88Q6ZMY6 472 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 ZNF836Q6ZNA1 936 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 Q6ZRG5 221 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 RNF165Q6ZSG1 346 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 SLC36A1Q7Z2H8 476 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 OR2W3Q7Z3T1 314 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 C6orf120Q7Z4R8 191 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 ZNF695Q8IW36 515 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 CTAGE3PQ8IX95 158 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 OSR2Q8N2R0 312 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 CADM2Q8N3J6 435 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 FAM71E2Q8N5Q1 922 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 COMMD1Q8N668 190 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 OR5D16Q8NGK9 328 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 OR5L1Q8NGL2 311 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 OR8U1Q8NH10 309 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 PYROXD1Q8WU10 500 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 GTSF1Q8WW33 167 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 CAPSLQ8WWF8 208 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 SLC38A4Q969I6 547 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 ROPN1LQ96C74 230 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 MALSU1Q96EH3 234 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 SLC25A44Q96H78 314 aaPredicted RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 MRPL57Q9BQC6 102 aaKnown RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 ARMC7Q9H6L4 198 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 DCLRE1BQ9H816 532 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 AMBNQ9NP70 447 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 TMEM100Q9NV29 134 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 PRPF19Q9UMS4 504 aaKnown RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 KLK5Q9Y337 293 aaPredicted RBP3.25□□□□□ -1.89
VPS50-214ENST00000477935 TMED5Q9Y3A6 229 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 TIMM10BQ9Y5J6 103 aa3.25□□□□□ -1.89
VPS50-214ENST00000477935 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 TRAV36DV7A0A075B6V5 113 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 EXOC1LA0A1B0GW35 172 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 A0A1B0GWJ7 208 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 TCRBV9S1A1TA0A576 114 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 PSMB11A5LHX3 300 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 CLDN24A6NM45 220 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 HDAC3O15379 428 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 PIAS1O75925 651 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 TXNDC12O95881 172 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 COX5BP10606 129 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 MUC1P15941 1255 aaPredicted RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 ZNF32P17041 273 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 IMPDH1P20839 514 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 HPCAL1P37235 193 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 GUCA1AP43080 201 aaPredicted RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 BIDP55957 195 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 RAB25P57735 213 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 NAA20P61599 178 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 LYZP61626 148 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 HERV-K104P63124 156 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 PSG4Q00888 419 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 ECH1Q13011 328 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 KIR2DS1Q14954 304 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 P2RY14Q15391 338 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 CNPY1Q3B7I2 92 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 ANKRD55Q3KP44 614 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 LRRC10Q5BKY1 277 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 CLEC12AQ5QGZ9 265 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 FAM27BQ5VT28 67 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms