RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 RAB27BO00194 218 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 NDUFB3O43676 98 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 PSPNO60542 156 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 ZNF737O75373 536 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 SCGNO76038 276 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 IGHV2-5P01817 119 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 WNT2P09544 360 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 ELK1P19419 428 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 FUT3P21217 361 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 CHATP28329 748 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 NKAPLQ5M9Q1 402 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 RAB12Q6IQ22 244 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 C17orf107Q6ZR85 190 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 LAX1Q8IWV1 398 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 SUMF2Q8NBJ7 301 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 OR10R2Q8NGX6 335 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 PPP1R35Q8TAP8 253 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 RAB39BQ96DA2 213 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 S100A16Q96FQ6 103 aaKnown RBP13.47□□□□□ -0.25
VHL-203ENST00000477538 SNX22Q96L94 193 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 DPCDQ9BVM2 203 aaPredicted RBP13.47□□□□□ -0.25
VHL-203ENST00000477538 CHST6Q9GZX3 395 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 PPA2Q9H2U2 334 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 PTTG2Q9NZH5 202 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 ADAM30Q9UKF2 790 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 PEX16Q9Y5Y5 336 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 SETXQ7Z333 2677 aaKnown RBP13.46□□□□□ -0.25
VHL-203ENST00000477538 K7N7A8 449 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 HSPB6O14558 160 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 TK1P04183 234 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 USF1P22415 310 aaPredicted RBP13.46□□□□□ -0.25
VHL-203ENST00000477538 CDK2P24941 298 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 OR3A1P47881 315 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 TMEM50BP56557 158 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 LMO4P61968 165 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 LRRC10Q5BKY1 277 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 BRICD5Q6PL45 260 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 C6orf201Q7Z4U5 140 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 RTN4RL2Q86UN3 420 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 OR8H2Q8N162 312 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 OR4S1Q8NGB4 309 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 NEK7Q8TDX7 302 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 RAB3CQ96E17 227 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 ARHGAP5-AS1Q96IT6 56 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 FAM234AQ9H0X4 552 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 PLEKHJ1Q9NW61 149 aa13.46□□□□□ -0.25
VHL-203ENST00000477538 SLC25A10Q9UBX3 287 aaPredicted RBP13.46□□□□□ -0.25
VHL-203ENST00000477538 A0A096LNT2 108 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 A0A0A6YYH2 397 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 A6NJ64 397 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 MCRIP1C9JLW8 97 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 RNF223E7ERA6 249 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 DVL1O14640 695 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 FCN3O75636 299 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 CLPXO76031 633 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 S100A5P33763 92 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 SEC61A1P61619 476 aaKnown RBP13.45□□□□□ -0.26
VHL-203ENST00000477538 RBM39Q14498 530 aaKnown RBP13.45□□□□□ -0.26
VHL-203ENST00000477538 ATXN7L3Q14CW9 347 aaPredicted RBP13.45□□□□□ -0.26
VHL-203ENST00000477538 GRK1Q15835 563 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 PLAC9Q5JTB6 97 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 ZNF841Q6ZN19 808 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 Q6ZTK2 550 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 FGFRL1Q8N441 504 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 BPIFB2Q8N4F0 458 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 OR5D13Q8NGL4 314 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 ST8SIA4Q92187 359 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 NUDT16L1Q9BRJ7 211 aaKnown RBP13.45□□□□□ -0.26
VHL-203ENST00000477538 PECRQ9BY49 303 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 REG4Q9BYZ8 158 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 SHARPINQ9H0F6 387 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 HSF4Q9ULV5 492 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 CREBBPQ92793 2442 aa13.45□□□□□ -0.26
VHL-203ENST00000477538 UBE2QL1A1L167 161 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 MGST3O14880 152 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 GLAP06280 429 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 HEXAP06865 529 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 HIST1H1DP16402 221 aaKnown RBP13.44□□□□□ -0.26
VHL-203ENST00000477538 NDUFB7P17568 137 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 IL2RGP31785 369 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 KCNJ3P48549 501 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 NPY4RP50391 375 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 GNB2P62879 340 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 LOXL1Q08397 574 aaPredicted RBP13.44□□□□□ -0.26
VHL-203ENST00000477538 ESCO2Q56NI9 601 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 WDR25Q64LD2 544 aaPredicted RBP13.44□□□□□ -0.26
VHL-203ENST00000477538 CNIH2Q6PI25 160 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 GDPD3Q7L5L3 318 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 IZUMO1Q8IYV9 350 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 DTX3Q8N9I9 347 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 OR4M1Q8NGD0 313 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 CYYR1Q96J86 154 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 SULT4A1Q9BR01 284 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 FAAP24Q9BTP7 215 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 SSBP3Q9BWW4 388 aaPredicted RBP13.44□□□□□ -0.26
VHL-203ENST00000477538 EXTL2Q9UBQ6 330 aa13.44□□□□□ -0.26
VHL-203ENST00000477538 CLN8Q9UBY8 286 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms