RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 SLC35E2P0CK97 266 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ST6GAL1P15907 406 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SELEP16581 610 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 NPPBP16860 134 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CSNK2A2P19784 350 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 UCP1P25874 307 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CEACAM8P31997 349 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SFTPDP35247 375 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 APOBEC1P41238 236 aaKnown RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 VIPR2P41587 438 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CDC34P49427 236 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PGFP49763 221 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SGSHP51688 502 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 HNRNPA3P51991 378 aaKnown RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PRRX1P54821 245 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 S100A10P60903 97 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 RHOAP61586 193 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 RPS15P62841 145 aaKnown RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 POLR2LP62875 67 aaKnown RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SUMO1P63165 101 aaKnown RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TFF2Q03403 129 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF92Q03936 586 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 RBPJQ06330 500 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 GPR18Q14330 331 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF77Q15935 545 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CDKN3Q16667 212 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 IAH1Q2TAA2 248 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ARHGAP11BQ3KRB8 267 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PRAMEF14Q5SWL7 426 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 FCRL6Q6DN72 434 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF343Q6P1L6 599 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 Q6YL49 198 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 COLCA1Q6ZS62 124 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 C19orf35Q6ZS72 473 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CYP2G1PQ6ZSU1 146 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ABHD12BQ7Z5M8 362 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TRAPPC6BQ86SZ2 158 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 LHFPL1Q86WI0 220 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 NIT1Q86X76 327 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM156Q8N614 296 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 OR5AU1Q8NGC0 362 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 OR52E2Q8NGJ4 325 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 OR51G1Q8NGK1 321 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 OR2T10Q8NGZ9 312 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CLDND2Q8NHS1 167 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM255BQ8WV15 326 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM234Q8WY98 164 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TOMM40LQ969M1 308 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PGAM5Q96HS1 289 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM56Q96MV1 263 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 FOXN4Q96NZ1 517 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 YPEL2Q96QA6 119 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SPIN2AQ99865 258 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SPIN2BQ9BPZ2 258 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 MACROD1Q9BQ69 325 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 KXD1Q9BQD3 176 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PRSS27Q9BQR3 290 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 MED20Q9H944 212 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF443Q9Y2A4 671 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PTRH2Q9Y3E5 179 aaKnown RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 WDR45Q9Y484 360 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 URGCP-MRPS24S4R325 110 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM56-RWDD3S4R434 201 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TCF20Q9UGU0 1960 aaKnown RBP4.09□□□□□ -1.76
PTCD3-212ENST00000477520 LOC105371242A0A075B767 164 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 NSG1A0A0A6YYJ2 146 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CENPVL1A0A0U1RR11 272 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 DUXBA0A1W2PPF3 345 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR5B21A6NL26 309 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 A6NNC1 897 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF814B7Z6K7 855 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 NPIPA7E9PJI5 369 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 FGF17O60258 216 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ALOX12BO75342 701 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CDS2O95674 445 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 TXNDC12O95881 172 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 TBX6O95947 436 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 KLKB1P03952 638 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 MAS1P04201 325 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ISG15P05161 165 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PCCBP05166 539 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CTSDP07339 412 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 NPIPA8P0DM63 369 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 TMIGD3P0DMS9 266 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 IL9P15248 144 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 IGFBP3P17936 291 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 FUT3P21217 361 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ANOS1P23352 680 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 GLRA1P23415 457 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 DUSP1P28562 367 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 SERPINA4P29622 427 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CMPK1P30085 196 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 BSGP35613 385 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 GALR1P47211 349 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 RGRP47804 291 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 FGF8P55075 233 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ELLP55199 621 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CLDN6P56747 220 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms