RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 UBL3O95164 117 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 TNFAIP8O95379 198 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 RAB36O95755 333 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 FADS2O95864 444 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 MRPL3P09001 348 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 CST2P09228 141 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 CLUP10909 449 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 DBTP11182 482 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 CD79AP11912 226 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 B4GALT1P15291 398 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 MYL12AP19105 171 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 PAX7P23759 505 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 HTR1FP30939 366 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ARR3P36575 388 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 CD79BP40259 229 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 NAA10P41227 235 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 ZNF133P52736 654 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 CXCR4P61073 352 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 PCBD1P61457 104 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 LSM6P62312 80 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 ACTC1P68032 377 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ACTA1P68133 377 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 HSF2Q03933 536 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SCRN3Q0VDG4 424 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 RAB40BQ12829 278 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 EIF2B1Q14232 305 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 GK2Q14410 553 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 GUSBP1Q15486 140 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 HIST3H3Q16695 136 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 C17orf58Q2M2W7 97 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ZNF674Q2M3X9 581 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SLC36A2Q495M3 483 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 RBM48Q5RL73 367 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 PHYHD1Q5SRE7 291 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 LINC00242Q5T6M2 205 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 AADACL4Q5VUY2 407 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 XKRXQ6PP77 449 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 AHSA2Q719I0 299 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 BHLHA15Q7RTS1 189 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 SSX8Q7RTT4 187 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SLC16A14Q7RTX9 510 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 DPY19L4Q7Z388 723 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 FAM220AQ7Z4H9 259 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 DPPA2Q7Z7J5 298 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 SLC35F2Q8IXU6 374 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 CCDC36Q8IYA8 594 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 OR6V1Q8N148 313 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 LRRC18Q8N456 261 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SLC22A24Q8N4F4 322 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 C11orf42Q8N5U0 333 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ZNF433Q8N7K0 673 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 ZNF540Q8NDQ6 660 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 BBS1Q8NFJ9 593 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 STEAP2Q8NFT2 490 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SLC26A10Q8NG04 563 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 OR10H4Q8NGA5 316 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 OR51G2Q8NGK0 314 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 OR6M1Q8NGM8 313 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 OR1K1Q8NGR3 316 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 THEM6Q8WUY1 208 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 APH1BQ8WW43 257 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ITLN1Q8WWA0 313 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 C11orf40Q8WZ69 217 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 MRPL24Q96A35 216 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 MUCL1Q96DR8 90 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 C5orf30Q96GV9 206 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 TMEM80Q96HE8 168 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 TEAD3Q99594 435 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 COPS4Q9BT78 406 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 HCAR1Q9BXC0 346 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 NMNAT2Q9BZQ4 307 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 YIPF3Q9GZM5 350 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 CCDC90BQ9GZT6 254 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SLC5A7Q9GZV3 580 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 WDR76Q9H967 626 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SIAEQ9HAT2 523 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 VCX3AQ9NNX9 186 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 NGBQ9NPG2 151 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 POLE4Q9NR33 117 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 TMEM38BQ9NVV0 291 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 LAMP5Q9UJQ1 280 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 IKZF2Q9UKS7 526 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 FBXL3Q9UKT7 428 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 SNX5Q9Y5X3 404 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 TMEM14AQ9Y6G1 99 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 KIF25-AS1Q9Y6Z4 181 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 COMMD3-BMI1R4GMX3 469 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 NBASA2RRP1 2371 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 HEATR1Q9H583 2144 aaKnown RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 IGKV1D-43A0A0B4J1Z2 117 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 NKX2-6A6NCS4 301 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 CCDC182A6NF36 153 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 OR5H1A6NKK0 313 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 J3QKU1 62 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 CHEK1O14757 476 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 CASKO14936 926 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 SGCEO43556 437 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 MRPS14O60783 128 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 WBP4O75554 376 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms