RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 IFNA21P01568 189 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 NUP62P37198 522 aaPredicted RBP13.38□□□□□ -0.27
LINC00996-201ENST00000477392 IDH3GP51553 393 aaPredicted RBP13.38□□□□□ -0.27
LINC00996-201ENST00000477392 HERPUD1Q15011 391 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 LIAT1Q6ZQX7 453 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 LINC00596Q86U02 117 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 FOXRED2Q8IWF2 684 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 BAP18Q8IXM2 172 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 GLYATL2Q8WU03 294 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 MSI2Q96DH6 328 aaKnown RBP13.38□□□□□ -0.27
LINC00996-201ENST00000477392 C18orf12Q96KH6 178 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
LINC00996-201ENST00000477392 A0A1B0GW55 424 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DEDDO75618 318 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 RHBDL1O75783 438 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 SCTP09683 121 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DUX4L2P0CJ85 424 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DUX4L3P0CJ86 424 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DUX4L4P0CJ87 422 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DUX4L5P0CJ88 424 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DUX4L6P0CJ89 424 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DUX4L7P0CJ90 424 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 HKR1P10072 659 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 NUBP1P53384 320 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 ERVS71-1P61550 626 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 PPP1CBP62140 327 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 IL13RA2Q14627 380 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 GABRA6Q16445 453 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DEFB109BQ30KR1 87 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 WDR86Q86TI4 376 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 C17orf78Q8N4C9 275 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 SUMF2Q8NBJ7 301 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 LHFPL5Q8TAF8 219 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DNTTIP1Q9H147 329 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 PLK3Q9H4B4 646 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 DUX4Q9UBX2 424 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 TRAV24A0A0B4J272 114 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 KRBOX1C9JBD0 128 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 H7C1Q1 480 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 J3QT63 122 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 FGF16O43320 207 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 GLI4P10075 376 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 KCNJ3P48549 501 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 UBE2NP61088 152 aaKnown RBP13.37□□□□□ -0.27
LINC00996-201ENST00000477392 TGFBR3Q03167 851 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 Q6ZT83 130 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 LYZL2Q7Z4W2 148 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 FAM58AQ8N1B3 248 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 C9orf106Q8NAJ2 232 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 OR2J1Q9GZK6 312 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 CDH20Q9HBT6 801 aa13.37□□□□□ -0.27
LINC00996-201ENST00000477392 IGKV1-6A0A0C4DH72 117 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 ZSCAN5BA6NJL1 495 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 KIR2DL2P43627 348 aaPredicted RBP13.36□□□□□ -0.27
LINC00996-201ENST00000477392 TCF15Q12870 199 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 OR2A2Q6IF42 318 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 ZNF585AQ6P3V2 769 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 CCDC36Q8IYA8 594 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 CCDC71LQ8N9Z2 235 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 MRPL30Q8TCC3 161 aaKnown RBP13.36□□□□□ -0.27
LINC00996-201ENST00000477392 NEK7Q8TDX7 302 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 TP53RKQ96S44 253 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 SYT3Q9BQG1 590 aa13.36□□□□□ -0.27
LINC00996-201ENST00000477392 TRDCB7Z8K6 153 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 BET1O15155 118 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 CEACAM4O75871 244 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 TUSC2O75896 110 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 GNRHRP30968 328 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 ALKBH6Q3KRA9 238 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 VWA1Q6PCB0 445 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 C20orf204Q6ZNR8 217 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 LDLRAD3Q86YD5 345 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 SUN5Q8TC36 379 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 GTF3AQ92664 365 aaKnown RBP13.35□□□□□ -0.27
LINC00996-201ENST00000477392 SPACA1Q9HBV2 294 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 TMEM100Q9NV29 134 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 TRBV6-6A0A0A6YYG2 114 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 PHF1O43189 567 aaPredicted RBP13.35□□□□□ -0.27
LINC00996-201ENST00000477392 MBPP02686 304 aaPredicted RBP13.35□□□□□ -0.27
LINC00996-201ENST00000477392 COX5AP20674 150 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 LGI3Q8N145 548 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 STPG2Q8N412 459 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 CNEP1R1Q8N9A8 125 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 GALNT11Q8NCW6 608 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 TMED6Q8WW62 240 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 PRRX2Q99811 253 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 RTL8AQ9BWD3 113 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 IFT22Q9H7X7 185 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 LSM5Q9Y4Y9 91 aaKnown RBP13.35□□□□□ -0.27
LINC00996-201ENST00000477392 ATP23Q9Y6H3 246 aa13.35□□□□□ -0.27
LINC00996-201ENST00000477392 LOC400499M0QZD8 3231 aa13.34□□□□□ -0.27
LINC00996-201ENST00000477392 IGKV1D-13A0A0B4J2D9 117 aa13.34□□□□□ -0.27
LINC00996-201ENST00000477392 KIR2DS1A0A191URI9 304 aa13.34□□□□□ -0.27
LINC00996-201ENST00000477392 MPPED1O15442 326 aa13.34□□□□□ -0.27
LINC00996-201ENST00000477392 TK1P04183 234 aa13.34□□□□□ -0.27
LINC00996-201ENST00000477392 IGKV1-13P0DP09 117 aa13.34□□□□□ -0.27
LINC00996-201ENST00000477392 KIR2DS4P43632 304 aa13.34□□□□□ -0.27
LINC00996-201ENST00000477392 NOVA1P51513 510 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms