RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TPRA1Q86W33 373 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 SUMF2Q8NBJ7 301 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 LY6G5BQ8NDX9 201 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 PLPPR1Q8TBJ4 325 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 OR5V1Q9UGF6 321 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 OPN4Q9UHM6 478 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 DAPK2Q9UIK4 370 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 NOTOA8MTQ0 251 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 A8MV72 311 aaPredicted RBP13.09□□□□□ -0.31
COPS3-207ENST00000477299 AIPO00170 330 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 OR7C1O76099 320 aaPredicted RBP13.09□□□□□ -0.31
COPS3-207ENST00000477299 GABARAPO95166 117 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 PAHP00439 452 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 SNRPBP14678 240 aaKnown RBP13.09□□□□□ -0.31
COPS3-207ENST00000477299 CPT2P23786 658 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 PSMD7P51665 324 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 ARF6P62330 175 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 RPS27AP62979 156 aaKnown RBP13.09□□□□□ -0.31
COPS3-207ENST00000477299 PAX8Q06710 450 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 AESQ08117 197 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 GPR176Q14439 515 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 ZNF273Q14593 569 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 ATXN7L3Q14CW9 347 aaPredicted RBP13.09□□□□□ -0.31
COPS3-207ENST00000477299 NHLRC3Q5JS37 347 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 ATAD3CQ5T2N8 411 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 DCAF12L2Q5VW00 463 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 SFXN4Q6P4A7 337 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 OR8H2Q8N162 312 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 OR5H6Q8NGV6 325 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 NDNFQ8TB73 568 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 DYRK2Q92630 601 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 COQ2Q96H96 371 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 LPAR5Q9H1C0 372 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 LIN7BQ9HAP6 207 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 GHRLQ9UBU3 117 aa13.09□□□□□ -0.31
COPS3-207ENST00000477299 TRAV39A0A0B4J263 110 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 PPIAL4CA0A0B4J2A2 164 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 SOCS1O15524 211 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 UBBP0CG47 229 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 PPIAL4GP0DN37 164 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 GLIPR1P48060 266 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 BMXP51813 675 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 SPCS2Q15005 226 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 PAN3Q58A45 887 aaKnown RBP13.08□□□□□ -0.32
COPS3-207ENST00000477299 IDNKQ5T6J7 187 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 TMEM200BQ69YZ2 307 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 TCF23Q7RTU1 214 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 FAM185AQ8N0U4 392 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 KCNG3Q8TAE7 436 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 DPCDQ9BVM2 203 aaPredicted RBP13.08□□□□□ -0.32
COPS3-207ENST00000477299 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 BARHL1Q9BZE3 327 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 FAM234AQ9H0X4 552 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 C7orf69Q9H7B7 122 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 GLS2Q9UI32 602 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 KCNS2Q9ULS6 477 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 MTORP42345 2549 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 HIVEP2P31629 2446 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 NF1P21359 2839 aa13.08□□□□□ -0.32
COPS3-207ENST00000477299 UBE2QL1A1L167 161 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 CCL3L1P16619 93 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 CFPP27918 469 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 EDDM3BP56851 147 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 FAM120AOSQ5T036 256 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 CD276Q5ZPR3 534 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 GDPD3Q7L5L3 318 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 C5orf24Q7Z6I8 188 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 Q8N7P7 452 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 C8orf46Q8TAG6 207 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 MRPS24Q96EL2 167 aaKnown RBP13.07□□□□□ -0.32
COPS3-207ENST00000477299 CST11Q9H112 138 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 PCDHB16Q9NRJ7 776 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 CEPT1Q9Y6K0 416 aa13.07□□□□□ -0.32
COPS3-207ENST00000477299 SETD2Q9BYW2 2564 aaPredicted RBP13.07□□□□□ -0.32
COPS3-207ENST00000477299 IGHV3OR16-10A0A075B7F0 116 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 A0A0G2JMP0 313 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 A0A0X1KG70 313 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 ENSAO43768 121 aaKnown RBP13.06□□□□□ -0.32
COPS3-207ENST00000477299 ECDO95905 644 aaPredicted RBP13.06□□□□□ -0.32
COPS3-207ENST00000477299 VEGFCP49767 419 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 TMEM50BP56557 158 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 RPL31P62899 125 aaKnown RBP13.06□□□□□ -0.32
COPS3-207ENST00000477299 RAB12Q6IQ22 244 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 OR2W3Q7Z3T1 314 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 C6orf201Q7Z4U5 140 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 C11orf42Q8N5U0 333 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 OR4M2Q8NGB6 313 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 LGALS14Q8TCE9 139 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 TBX15Q96SF7 602 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 SULT4A1Q9BR01 284 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 TM2D1Q9BX74 207 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 SIRPDQ9H106 197 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 IFT22Q9H7X7 185 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
COPS3-207ENST00000477299 PEX16Q9Y5Y5 336 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 SOX21Q9Y651 276 aaPredicted RBP13.06□□□□□ -0.32
COPS3-207ENST00000477299 ZFHX3Q15911 3703 aa13.06□□□□□ -0.32
COPS3-207ENST00000477299 C2CD3Q4AC94 2353 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 NSD1Q96L73 2696 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms