RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 LINC00052Q96N35 136 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 CNTNAP3BQ96NU0 1288 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 CNTNAP3Q9BZ76 1288 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 SLC5A7Q9GZV3 580 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 MEMO1Q9Y316 297 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 CACNA1HO95180 2353 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 TRAV24A0A0B4J272 114 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 A0A1W2PR80 420 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 PRR33A8MZF0 331 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 LYZL6O75951 148 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 PRKACAP17612 351 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 TGFBR3Q03167 851 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 IGFBP7Q16270 282 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 DEFB109BQ30KR1 87 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 ABCA11PQ4W5N1 156 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 PHLDA2Q53GA4 152 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 FAM209AQ5JX71 171 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 ZNF880Q6PDB4 577 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 INO80CQ6PI98 192 aaPredicted RBP9.8□□□□□ -0.84
NUP188-205ENST00000477069 LIAT1Q6ZQX7 453 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 SUMF2Q8NBJ7 301 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 OR11L1Q8NGX0 322 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 MRPL30Q8TCC3 161 aaKnown RBP9.8□□□□□ -0.84
NUP188-205ENST00000477069 RHOFQ9HBH0 211 aa9.8□□□□□ -0.84
NUP188-205ENST00000477069 IGKV1-6A0A0C4DH72 117 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 J3QT63 122 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TM4SF5O14894 197 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 FGF16O43320 207 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 RHBDL1O75783 438 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TUSC2O75896 110 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 SCTP09683 121 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 ERVS71-1P61550 626 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 PPP1CBP62140 327 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TSC22D1Q15714 1073 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 SP6Q3SY56 376 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 LRRC20Q8TCA0 184 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 GLYATL2Q8WU03 294 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 WNT2BQ93097 391 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TAAR6Q96RI8 345 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 OR2J1Q9GZK6 312 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 DNTTIP1Q9H147 329 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 FAM86C1Q9NVL1 165 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TTC28Q96AY4 2481 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 ZNF891A8MT65 544 aaPredicted RBP9.79□□□□□ -0.84
NUP188-205ENST00000477069 H7C1Q1 480 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 DEDDO75618 318 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 IGKV3-15P01624 115 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 GLAP06280 429 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 HKR1P10072 659 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
NUP188-205ENST00000477069 SPINK2P20155 84 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 IL32P24001 234 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 IDH3GP51553 393 aaPredicted RBP9.79□□□□□ -0.84
NUP188-205ENST00000477069 UBE2NP61088 152 aaKnown RBP9.79□□□□□ -0.84
NUP188-205ENST00000477069 ACSF3Q4G176 576 aaPredicted RBP9.79□□□□□ -0.84
NUP188-205ENST00000477069 Q6P435 159 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 VWA1Q6PCB0 445 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 C20orf204Q6ZNR8 217 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 FAM58AQ8N1B3 248 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 WDR31Q8NA23 367 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 C1orf162Q8NEQ5 155 aaPredicted RBP9.79□□□□□ -0.84
NUP188-205ENST00000477069 LHFPL5Q8TAF8 219 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 SPACA1Q9HBV2 294 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TMEM100Q9NV29 134 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 GSKIPQ9P0R6 139 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 NUP50Q9UKX7 468 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 KCNIP3Q9Y2W7 256 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 ATP23Q9Y6H3 246 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TRDCB7Z8K6 153 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TEX46H3BTG2 121 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 TPT1P13693 172 aaKnown RBP9.79□□□□□ -0.84
NUP188-205ENST00000477069 DUSP1P28562 367 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 GNRHRP30968 328 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 ERVK11-1P61568 191 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 HERV-K104P61576 105 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 RTP5Q14D33 572 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 SARAFQ96BY9 339 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 DKK4Q9UBT3 224 aa9.79□□□□□ -0.84
NUP188-205ENST00000477069 LRP5LA4QPB2 252 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 IQCF6A8MYZ5 107 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 S100A10P60903 97 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 RND3P61587 244 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 MRPL49Q13405 166 aaKnown RBP9.78□□□□□ -0.84
NUP188-205ENST00000477069 BAP18Q8IXM2 172 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 C17orf78Q8N4C9 275 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 TP53RKQ96S44 253 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 RTL8AQ9BWD3 113 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 RIMS4Q9H426 269 aaPredicted RBP9.78□□□□□ -0.84
NUP188-205ENST00000477069 CDH20Q9HBT6 801 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 ZNF292O60281 2723 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 HSPB6O14558 160 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 IFNA21P01568 189 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 CEACAM1P13688 526 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 RAC2P15153 192 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 CBR1P16152 277 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 FOXF2Q12947 444 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 ALKBH6Q3KRA9 238 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 PCSK4Q6UW60 755 aa9.78□□□□□ -0.84
NUP188-205ENST00000477069 LYZL2Q7Z4W2 148 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms