RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ZNF146Q15072 292 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 PTGES3Q15185 160 aaKnown RBP9.39□□□□□ -0.91
HDAC6-219ENST00000476625 AADACL4Q5VUY2 407 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 Q6P435 159 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 OVCH2Q7RTZ1 564 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 SBSPONQ8IVN8 264 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 STPG2Q8N412 459 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 OR13A1Q8NGR1 328 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 MUC7Q8TAX7 377 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 CORO2AQ92828 525 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 KIRREL1Q96J84 757 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 DCLRE1BQ9H816 532 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 ZNF556Q9HAH1 456 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 HMG20AQ9NP66 347 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 EXOSC4Q9NPD3 245 aaKnown RBP9.39□□□□□ -0.91
HDAC6-219ENST00000476625 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-219ENST00000476625 TMEM14AQ9Y6G1 99 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-219ENST00000476625 DHRS7CA6NNS2 312 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 SEC14L6B5MCN3 397 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-219ENST00000476625 ZNF44P15621 663 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 GLP1RP43220 463 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 MTCP1P56278 107 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 SPATS1Q496A3 300 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 TP53I3Q53FA7 332 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 OR52W1Q6IF63 320 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 PIGWQ7Z7B1 504 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 UBALD1Q8TB05 177 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 RPEQ96AT9 228 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 LRGUKQ96M69 825 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 CLN6Q9NWW5 311 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 TAS2R3Q9NYW6 316 aa9.38□□□□□ -0.91
HDAC6-219ENST00000476625 STARD9Q9P2P6 4700 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 A0A087X0M5 115 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 A0A1B0GX30 115 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 H3BUI4 141 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 J3QR06 171 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 GATBO75879 557 aaKnown RBP9.37□□□□□ -0.91
HDAC6-219ENST00000476625 LY86O95711 162 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 IGHG2P01859 326 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 FAM106CPP0CH98 169 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 T-ENOLP0DO92 83 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 ATF1P18846 271 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 CEACAM3P40198 252 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 MNDAP41218 407 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 RBP2P50120 134 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 ATP1B3P54709 279 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 PDZK1IP1Q13113 114 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 ASPHD1Q5U4P2 390 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 OR4D6Q8NGJ1 314 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 OR51A4Q8NGJ6 313 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 RFESDQ8TAC1 157 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 FGGYQ96C11 551 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 ASB9Q96DX5 294 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 RCHY1Q96PM5 261 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 HSPB9Q9BQS6 159 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 NDE1Q9NXR1 346 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 KIF25Q9UIL4 384 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 PSG11Q9UQ72 335 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 ARL2BPQ9Y2Y0 163 aa9.37□□□□□ -0.91
HDAC6-219ENST00000476625 ZNF736B4DX44 427 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-219ENST00000476625 SH2D1BO14796 132 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 RAMP3O60896 148 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 FKBP6O75344 327 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 KRT8P05787 483 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 CGB3P0DN86 165 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 CGB7P0DN87 165 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ANXA8P13928 327 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ARHGDIBP52566 201 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 PRRX1P54821 245 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 NANOS3P60323 173 aaKnown RBP9.36□□□□□ -0.91
HDAC6-219ENST00000476625 EFNB1P98172 346 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ZNF85Q03923 595 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 CDK5R1Q15078 307 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ZNF260Q3ZCT1 412 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 SPIN3Q5JUX0 258 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 C9orf66Q5T8R8 295 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 C12orf73Q69YU5 71 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ENTHD1Q8IYW4 607 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 OR10H4Q8NGA5 316 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 OR9G1Q8NH87 305 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 PLPPR1Q8TBJ4 325 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 TMEM163Q8TC26 289 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ITFG2Q969R8 447 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 CYYR1Q96J86 154 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 OR5B12Q96R08 314 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 COMMD4Q9H0A8 199 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 SEBOXQ9HB31 216 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-219ENST00000476625 ZFP57Q9NU63 452 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 MYRFQ9Y2G1 1151 aa9.36□□□□□ -0.91
HDAC6-219ENST00000476625 LCE6AA0A183 80 aa9.35□□□□□ -0.91
HDAC6-219ENST00000476625 METTL15A6NJ78 407 aa9.35□□□□□ -0.91
HDAC6-219ENST00000476625 ZNF729A6NN14 1252 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms