RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 LINC00596Q86U02 117 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 RTN4RL2Q86UN3 420 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 ZNF565Q8N9K5 539 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 BPIFB6Q8NFQ5 453 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 OR4S1Q8NGB4 309 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 OR11H6Q8NGC7 330 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 OR4D6Q8NGJ1 314 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 OR4C13Q8NGP0 309 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 ZNF596Q8TC21 504 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 RPS4Y2Q8TD47 263 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 GGHQ92820 318 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 GHSRQ92847 366 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 MYDGFQ969H8 173 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 CLEC7AQ9BXN2 247 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 BARHL1Q9BZE3 327 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 RANBP3Q9H6Z4 567 aaPredicted RBP8.32□□□□□ -1.08
CCM2-208ENST00000476594 ZNF696Q9H7X3 374 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 TAS2R4Q9NYW5 299 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 IL36RNQ9UBH0 155 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 MINOS1-NBL1R4GNA1 71 aa8.32□□□□□ -1.08
CCM2-208ENST00000476594 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 ZNF729A6NN14 1252 aaPredicted RBP8.31□□□□□ -1.08
CCM2-208ENST00000476594 GABRPO00591 440 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 TSPAN9O75954 239 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 CD1AP06126 327 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 C21orf33P30042 268 aaPredicted RBP8.31□□□□□ -1.08
CCM2-208ENST00000476594 CEACAM3P40198 252 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 HSPA13P48723 471 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 DLX1P56177 255 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 DLX6P56179 175 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 BDH1Q02338 343 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 PRB3Q04118 309 aaPredicted RBP8.31□□□□□ -1.08
CCM2-208ENST00000476594 FAM189A2Q15884 450 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 PAN3Q58A45 887 aaKnown RBP8.31□□□□□ -1.08
CCM2-208ENST00000476594 DMKNQ6E0U4 476 aaPredicted RBP8.31□□□□□ -1.08
CCM2-208ENST00000476594 HCP5Q6MZN7 132 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 ZNF529Q6P280 563 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 C11orf42Q8N5U0 333 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 TPRX1Q8N7U7 411 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 OR52N4Q8NGI2 321 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 OR51A2Q8NGJ7 313 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 OR51T1Q8NGJ9 327 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 NDNFQ8TB73 568 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 WFDC12Q8WWY7 111 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
CCM2-208ENST00000476594 NR1H4Q96RI1 486 aaPredicted RBP8.31□□□□□ -1.08
CCM2-208ENST00000476594 MND1Q9BWT6 205 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 NPFFR1Q9GZQ6 430 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 TMEM133Q9H2Q1 129 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 PPA2Q9H2U2 334 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 C16orf95Q9H693 158 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 RAB9BQ9NP90 201 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 IL36GQ9NZH8 169 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 PSORS1C1Q9UIG5 152 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 ING4Q9UNL4 249 aa8.31□□□□□ -1.08
CCM2-208ENST00000476594 IGHV2-26A0A0B4J1V2 119 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 A0A0G2JK05 382 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 TRBV5-5A0A0J9YX44 114 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 ODAMA1E959 279 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 VGLL3A8MV65 326 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 ODF3BA8MYP8 253 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 M0QZ24 198 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 F2RL2O00254 374 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 SLC33A1O00400 549 aaPredicted RBP8.3□□□□□ -1.08
CCM2-208ENST00000476594 TOR1AO14656 332 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 XPNPEP2O43895 674 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 GPX5O75715 221 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 HTR3BO95264 441 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 CALCBP10092 127 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 FSTP19883 344 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 HTR1DP28221 377 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 GABRA5P31644 462 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 PRRX1P54821 245 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 AESQ08117 197 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 MPV17LQ2QL34 196 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 NHLRC3Q5JS37 347 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 PRR31Q5SQ13 230 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 XAF1Q6GPH4 301 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 ASPHD2Q6ICH7 369 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 HEPN1Q6WQI6 88 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 CDH26Q8IXH8 852 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 OSR2Q8N2R0 312 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 MS4A15Q8N5U1 240 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 NKAIN3Q8N8D7 197 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 OR2T6Q8NHC8 308 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 LINC01006Q8NI28 216 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 CAPSLQ8WWF8 208 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 RGP1Q92546 391 aaPredicted RBP8.3□□□□□ -1.08
CCM2-208ENST00000476594 TFAP2CQ92754 450 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 CORO2AQ92828 525 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 AKR1E2Q96JD6 320 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 ZNF184Q99676 751 aaPredicted RBP8.3□□□□□ -1.08
CCM2-208ENST00000476594 NCOR1P1Q9H4R4 102 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 SPACA1Q9HBV2 294 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 CLEC2DQ9UHP7 191 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 FOXJ3Q9UPW0 622 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 TPRKBQ9Y3C4 175 aa8.3□□□□□ -1.08
CCM2-208ENST00000476594 AMMECR1Q9Y4X0 333 aaPredicted RBP8.3□□□□□ -1.08
CCM2-208ENST00000476594 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms