RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 C17orf78Q8N4C9 275 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 ZIC4Q8N9L1 334 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 ACTL9Q8TC94 416 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 PITX2Q99697 317 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 SHANK2-AS3Q9BTD1 123 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 PLA2G12AQ9BZM1 189 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 M0QXV9 152 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 CGB3P0DN86 165 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 CGB7P0DN87 165 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 CNTFRP26992 372 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 NUDT2P50583 147 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 HBG1P69891 147 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 HBG2P69892 147 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 FLI1Q01543 452 aaPredicted RBP3.01□□□□□ -1.93
VPS50-212ENST00000476413 FMODQ06828 376 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 PRDX1Q06830 199 aaKnown RBP3.01□□□□□ -1.93
VPS50-212ENST00000476413 ENDOGQ14249 297 aaKnown RBP3.01□□□□□ -1.93
VPS50-212ENST00000476413 OR4D1Q15615 310 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 LDLRAD2Q5SZI1 272 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 LRRC6Q86X45 466 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 CYTH2Q99418 400 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 TAS2R13Q9NYV9 303 aa3.01□□□□□ -1.93
VPS50-212ENST00000476413 UBDO15205 165 aa3□□□□□ -1.93
VPS50-212ENST00000476413 TRGV3P03979 118 aa3□□□□□ -1.93
VPS50-212ENST00000476413 SLC2A1P11166 492 aa3□□□□□ -1.93
VPS50-212ENST00000476413 ZNF35P13682 527 aa3□□□□□ -1.93
VPS50-212ENST00000476413 TGFBR2P37173 567 aa3□□□□□ -1.93
VPS50-212ENST00000476413 ZNF235Q14590 738 aa3□□□□□ -1.93
VPS50-212ENST00000476413 ZFAND6Q6FIF0 208 aa3□□□□□ -1.93
VPS50-212ENST00000476413 LAMTOR1Q6IAA8 161 aa3□□□□□ -1.93
VPS50-212ENST00000476413 FAM183BPQ6ZVS7 135 aa3□□□□□ -1.93
VPS50-212ENST00000476413 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
VPS50-212ENST00000476413 DPPA2Q7Z7J5 298 aa3□□□□□ -1.93
VPS50-212ENST00000476413 AMN1Q8IY45 258 aa3□□□□□ -1.93
VPS50-212ENST00000476413 ACBD4Q8NC06 268 aa3□□□□□ -1.93
VPS50-212ENST00000476413 FAM45AQ8TCE6 357 aa3□□□□□ -1.93
VPS50-212ENST00000476413 PHF10Q8WUB8 498 aaKnown RBP3□□□□□ -1.93
VPS50-212ENST00000476413 IFT81Q8WYA0 676 aa3□□□□□ -1.93
VPS50-212ENST00000476413 OLFM3Q96PB7 478 aa3□□□□□ -1.93
VPS50-212ENST00000476413 RHOFQ9HBH0 211 aa3□□□□□ -1.93
VPS50-212ENST00000476413 MS4A12Q9NXJ0 267 aa3□□□□□ -1.93
VPS50-212ENST00000476413 ZNF586Q9NXT0 402 aa3□□□□□ -1.93
VPS50-212ENST00000476413 FADS3Q9Y5Q0 445 aa3□□□□□ -1.93
VPS50-212ENST00000476413 R4GN34 69 aa3□□□□□ -1.93
VPS50-212ENST00000476413 H3BQ85 93 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 RGS5O15539 181 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 FABP7O15540 132 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 CRXO43186 299 aaPredicted RBP2.99□□□□□ -1.93
VPS50-212ENST00000476413 TCF21O43680 179 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 ENTPD6O75354 484 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 NDUFS6O75380 124 aaKnown RBP2.99□□□□□ -1.93
VPS50-212ENST00000476413 PTHLHP12272 177 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 COL8A2P25067 703 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 ELK4P28324 431 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 SLAMF1Q13291 335 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 WDR59Q6PJI9 974 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 GATD1Q8NB37 220 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 C2orf15Q8WU43 125 aaKnown RBP2.99□□□□□ -1.93
VPS50-212ENST00000476413 GTF2H4Q92759 462 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 MAL2Q969L2 176 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 PGLYRP3Q96LB9 341 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 OR2V2Q96R30 315 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 CFAP45Q9UL16 551 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 C14orf166Q9Y224 244 aaKnown RBP2.99□□□□□ -1.93
VPS50-212ENST00000476413 SHROOM3Q8TF72 1996 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 ATRNO75882 1429 aa2.99□□□□□ -1.93
VPS50-212ENST00000476413 ABCB11O95342 1321 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 USP42Q9H9J4 1324 aaKnown RBP2.98□□□□□ -1.93
VPS50-212ENST00000476413 IGHV3-21A0A0B4J1V1 117 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 A8MWP4 228 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 C8orf87E5RJ46 101 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 POLR3GO15318 223 aaPredicted RBP2.98□□□□□ -1.93
VPS50-212ENST00000476413 TNFAIP8O95379 198 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 SCGB1C2P0DMR2 95 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 HRES1P13985 223 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 SYT1P21579 422 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 RAB31Q13636 194 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 FLOT2Q14254 428 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 TTMPQ5BVD1 217 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 DGAT2L6Q6ZPD8 337 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 CLEC20AQ6ZU45 233 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 SLC25A45Q8N413 288 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 SCGB1C1Q8TD33 95 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 TWIST2Q8WVJ9 160 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 ATP6V1G3Q96LB4 118 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 APOL4Q9BPW4 351 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 ULBP1Q9BZM6 244 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 TXNIPQ9H3M7 391 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 CACNA1DQ01668 2161 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 PRR14LQ5THK1 2151 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 MYO15BQ96JP2 1530 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 ZSWIM8A7E2V4 1837 aa2.98□□□□□ -1.93
VPS50-212ENST00000476413 IGHV2-26A0A0B4J1V2 119 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 FAM183AA6NL82 134 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 C4orf51C9J302 202 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 F5H5P2 479 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms