RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 OMGP23515 440 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 CEACAM6P40199 344 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 MRPS11P82912 194 aaKnown RBP7.29□□□□□ -1.24
VAPB-205ENST00000476395 PMP22Q01453 160 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 RSPO4Q2I0M5 234 aaPredicted RBP7.29□□□□□ -1.24
VAPB-205ENST00000476395 DEFB119Q8N690 84 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 ADPRHL1Q8NDY3 354 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 SLAMF6Q96DU3 332 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 NUDT11Q96G61 164 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 FAAP24Q9BTP7 215 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 ZNF581Q9P0T4 197 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 OSGIN2Q9Y236 505 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 A4D1N5 150 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 TMEM150CB9EJG8 249 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 DKK1O94907 266 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 GP1BBP13224 206 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 CTSEP14091 401 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 UCP2P55851 309 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 FAM3AP98173 230 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 HIST3H3Q16695 136 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 OR5D18Q8NGL1 313 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 OR5R1Q8NH85 324 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 M1APQ8TC57 530 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 GPR87Q9BY21 358 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 SRPK3Q9UPE1 567 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 NCKAP5O14513 1909 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 IGHV1OR15-9A0A0B4J2B8 117 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 LIPT2A6NK58 231 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 DHRS7CA6NNS2 312 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 MPIG6BO95866 241 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 CCL1P22362 96 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 IL12BP29460 328 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 RAB1AP62820 205 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 DEFB133Q30KQ1 61 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 HIST2H3PS2Q5TEC6 136 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 SHISA6Q6ZSJ9 500 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 TMEM123Q8N131 208 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 PPP1R35Q8TAP8 253 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 SYT3Q9BQG1 590 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 HIPK2Q9H2X6 1198 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.29□□□□□ -1.24
VAPB-205ENST00000476395 MED12Q93074 2177 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 NCOR1O75376 2440 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 A0A1W2PNV4 684 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 TLX3O43711 291 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 CDC14BO60729 498 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 LINC00614P0C842 121 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 CDAP32320 146 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 OR1D5P58170 312 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 HSF1Q00613 529 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 RUNX1Q01196 453 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 COL10A1Q03692 680 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 FOXF1Q12946 379 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 CNN3Q15417 329 aaKnown RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 TDRG1Q3Y452 100 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 VAX1Q5SQQ9 334 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 SPSB3Q6PJ21 355 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 Q6ZPA2 131 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 CPEB2Q7Z5Q1 589 aaKnown RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 OR8B12Q8NGG6 310 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 OR4X1Q8NH49 305 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 OR51E1Q8TCB6 317 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 NANOS1Q8WY41 292 aaKnown RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 ARHGAP5-AS1Q96IT6 56 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 ZNF385AQ96PM9 386 aaKnown RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 PLA2G3Q9NZ20 509 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 ARHGAP21Q5T5U3 1957 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 RBFOX3A6NFN3 312 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 A6NIZ1 184 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 NXPH3O95157 252 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 SRP19P09132 144 aaKnown RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 SUCLG1P53597 346 aaKnown RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 EMP2P54851 167 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 RAP1BP61224 184 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 NHLH1Q02575 133 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 POU3F1Q03052 451 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 SCGB2A2Q13296 93 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 NSDHLQ15738 373 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 SULF2Q8IWU5 870 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 FAM89BQ8N5H3 189 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 KLHDC7BQ96G42 594 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 MEGF11A6BM72 1044 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 ANKUB1A6NFN9 424 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 C2CD4DB7Z1M9 353 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 TAAR5O14804 337 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 TIAF1O95411 115 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 CYB5R3P00387 301 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 ELLP55199 621 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 ZNF121P58317 390 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 DAZAP2Q15038 168 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 KCNMB1Q16558 191 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 C6orf15Q6UXA7 325 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 D2HGDHQ8N465 521 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 SLC35G3Q8N808 338 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 DTWD2Q8NBA8 298 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 OR10A7Q8NGE5 316 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 RAB24Q969Q5 203 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 ZNF501Q96CX3 271 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms