RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 OR13D1Q8NGV5 346 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 TMEM138Q9NPI0 162 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 ERGIC3Q9Y282 383 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 LINC00312Q9Y6C7 94 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 ALDOBP05062 364 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 C21orf33P30042 268 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-205ENST00000476387 BDKRB2P30411 391 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 DLX6P56179 175 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 P2RX3P56373 397 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 KRTAP10-3P60369 221 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 RIPK1Q13546 671 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 Q499Y3 187 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 ZNF485Q8NCK3 441 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 BEND2Q8NDZ0 799 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 NRG4Q8WWG1 115 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 PGLYRP3Q96LB9 341 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 S100A13Q99584 98 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 PPA2Q9H2U2 334 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 MMP27Q9H306 513 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 SCN3BQ9NY72 215 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 CMYA5Q8N3K9 4069 aa13.17□□□□□ -0.3
COL1A1-205ENST00000476387 TRBV5-5A0A0J9YX44 114 aa13.16□□□□□ -0.3
COL1A1-205ENST00000476387 IGHV1-8P0DP01 117 aa13.16□□□□□ -0.3
COL1A1-205ENST00000476387 ERP29P30040 261 aaKnown RBP13.16□□□□□ -0.3
COL1A1-205ENST00000476387 ZNF93P35789 620 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-205ENST00000476387 C6orf141Q5SZD1 244 aa13.16□□□□□ -0.3
COL1A1-205ENST00000476387 TCF23Q7RTU1 214 aa13.16□□□□□ -0.3
COL1A1-205ENST00000476387 MYDGFQ969H8 173 aa13.16□□□□□ -0.3
COL1A1-205ENST00000476387 NR1H4Q96RI1 486 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-205ENST00000476387 MND1Q9BWT6 205 aa13.16□□□□□ -0.3
COL1A1-205ENST00000476387 FKBP14Q9NWM8 211 aa13.16□□□□□ -0.3
COL1A1-205ENST00000476387 TRGV10A0A0A0MS01 117 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 DEGS1O15121 323 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 CDK1P06493 297 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 CELP19835 753 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 FSTP19883 344 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 LMO1P25800 156 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 OR3A4PP47883 348 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 DEFA6Q01524 100 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 AANATQ16613 207 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 LRRC75BQ2VPJ9 315 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 PDLIM3Q53GG5 364 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-205ENST00000476387 ELP2Q6IA86 826 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 THRSPQ92748 146 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 ORAI1Q96D31 301 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 OR14A2Q96R54 314 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 GAL3ST2Q9H3Q3 398 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 TCF7L1Q9HCS4 588 aa13.15□□□□□ -0.3
COL1A1-205ENST00000476387 PAK1IP1Q9NWT1 392 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-205ENST00000476387 UBE2J1Q9Y385 318 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-205ENST00000476387 A0A0G2JK05 382 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 H3BUX3 64 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 SLC33A1O00400 549 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 HTR3BO95264 441 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 CSTBP04080 98 aaKnown RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 ARG1P05089 322 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 CSN2P05814 226 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 MAPK3P27361 379 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 PTGFRP43088 359 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 AESQ08117 197 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 DYNC1I2Q13409 638 aaKnown RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 ATXN7L3Q14CW9 347 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 PAN3Q58A45 887 aaKnown RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 KRBOX4Q5JUW0 171 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 Q6P435 159 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 OR10K1Q8NGX5 313 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 C17orf50Q8WW18 174 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 FOXRED1Q96CU9 486 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 ZNF184Q99676 751 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 NKX3-1Q99801 234 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 SSX3Q99909 188 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 METTL9Q9H1A3 318 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 MEGF9Q9H1U4 602 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 ING4Q9UNL4 249 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 TBL2Q9Y4P3 447 aaKnown RBP13.14□□□□□ -0.31
COL1A1-205ENST00000476387 SESN1Q9Y6P5 492 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 TGP01266 2768 aa13.14□□□□□ -0.31
COL1A1-205ENST00000476387 ODAMA1E959 279 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 HSPB6O14558 160 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 CDRT1O95170 752 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 CD1AP06126 327 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 IGFBP3P17936 291 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-205ENST00000476387 MYF6P23409 242 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 HSPA13P48723 471 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 RPS11P62280 158 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL1A1-205ENST00000476387 BDH1Q02338 343 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 PIGYQ3MUY2 71 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 RNLSQ5VYX0 342 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 IZUMO2Q6UXV1 221 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 OR51T1Q8NGJ9 327 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 PCDHB16Q9NRJ7 776 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 ING3Q9NXR8 418 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 IL36GQ9NZH8 169 aa13.13□□□□□ -0.31
COL1A1-205ENST00000476387 TPRKBQ9Y3C4 175 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms