RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GSTK1Q9Y2Q3 226 aa10.42□□□□□ -0.74
MRPL55-228ENST00000476267 NOTCH3Q9UM47 2321 aa10.42□□□□□ -0.74
MRPL55-228ENST00000476267 WI2-2373I1.2A0A1W2PRP0 233 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 ODAMA1E959 279 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 H3BUI4 141 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 SLC33A1O00400 549 aaPredicted RBP10.41□□□□□ -0.74
MRPL55-228ENST00000476267 SH2D1BO14796 132 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 DUS4LO95620 317 aaKnown RBP10.41□□□□□ -0.74
MRPL55-228ENST00000476267 CYB5AP00167 134 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 PF4P02776 101 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 PRKACBP22694 351 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 FASP25445 335 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 CCR9P51686 369 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 CDK5R1Q15078 307 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 VAX1Q5SQQ9 334 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 C11orf87Q6NUJ2 197 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 FAM220AQ7Z4H9 259 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 AMIGO2Q86SJ2 522 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 SAXO1Q8IYX7 474 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 OSR2Q8N2R0 312 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 RFT1Q96AA3 541 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 SPACA5Q96QH8 159 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 OSBPL10Q9BXB5 764 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 PPIL3Q9H2H8 161 aaKnown RBP10.41□□□□□ -0.74
MRPL55-228ENST00000476267 RHOFQ9HBH0 211 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 GLS2Q9UI32 602 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 AP4S1Q9Y587 144 aa10.41□□□□□ -0.74
MRPL55-228ENST00000476267 FUOMA2VDF0 154 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 OR4C45A6NMZ5 311 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 ZNF729A6NN14 1252 aaPredicted RBP10.4□□□□□ -0.74
MRPL55-228ENST00000476267 OOSP1A8MZH6 123 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 CEACAM3P40198 252 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 PTGFRP43088 359 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 ZP1P60852 638 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 SLC25A30Q5SVS4 291 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 KCTD20Q7Z5Y7 419 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 CHST4Q8NCG5 386 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 OR5D18Q8NGL1 313 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 BCAS4Q8TDM0 211 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 STMN2Q93045 179 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 RFKQ969G6 155 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 CREB3L1Q96BA8 519 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 KIRREL1Q96J84 757 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 LINC00574Q9H8X3 128 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 OAZ3Q9UMX2 235 aa10.4□□□□□ -0.74
MRPL55-228ENST00000476267 M0QZK8 103 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 SLC16A6O15403 523 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 ZNF20P17024 532 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 ATP6V1E1P36543 226 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 ARHGDIBP52566 201 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 BNIP1Q12981 228 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 ATXN7L3Q14CW9 347 aaPredicted RBP10.39□□□□□ -0.75
MRPL55-228ENST00000476267 KRBOX4Q5JUW0 171 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 THNSL2Q86YJ6 484 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 MRPL41Q8IXM3 137 aaKnown RBP10.39□□□□□ -0.75
MRPL55-228ENST00000476267 OR51T1Q8NGJ9 327 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 OR13C9Q8NGT0 318 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 PELI1Q96FA3 418 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 RIBC2Q9H4K1 309 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 MYRFQ9Y2G1 1151 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 PCDHGB5Q9Y5G0 923 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 HSPE1-MOB4S4R3N1 261 aa10.39□□□□□ -0.75
MRPL55-228ENST00000476267 KBTBD11-OT1A0A1B0GTJ5 212 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 A0A1W2PPI3 338 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 FCGR1AP12314 374 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 ZNF44P15621 663 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 HOXD3P31249 432 aaPredicted RBP10.38□□□□□ -0.75
MRPL55-228ENST00000476267 THBS3P49746 956 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 PAX5Q02548 391 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 KPNB1Q14974 876 aaKnown RBP10.38□□□□□ -0.75
MRPL55-228ENST00000476267 CCDC144NLQ6NUI1 221 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 C5orf56Q8N8D9 126 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 OR9G1Q8NH87 305 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 CAPSLQ8WWF8 208 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 TRUB1Q8WWH5 349 aaKnown RBP10.38□□□□□ -0.75
MRPL55-228ENST00000476267 HRASLS5Q96KN8 279 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 NCOR1P1Q9H4R4 102 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 EXOGQ9Y2C4 368 aaKnown RBP10.38□□□□□ -0.75
MRPL55-228ENST00000476267 NBEAL2Q6ZNJ1 2754 aa10.38□□□□□ -0.75
MRPL55-228ENST00000476267 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 NPIPB11E5RHQ5 1161 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 J3QR06 171 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 TOR1AO14656 332 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 SNRNP70P08621 437 aaKnown RBP10.37□□□□□ -0.75
MRPL55-228ENST00000476267 HTR1AP08908 422 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 MNDAP41218 407 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 OR3A4PP47883 348 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 PRRX1P54821 245 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 SNRPGP62308 76 aaKnown RBP10.37□□□□□ -0.75
MRPL55-228ENST00000476267 RPL23AP62750 156 aaKnown RBP10.37□□□□□ -0.75
MRPL55-228ENST00000476267 DIAPH2-AS1Q14236 149 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 KISS1Q15726 138 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 ELP2Q6IA86 826 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 PARP16Q8N5Y8 322 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 OR13A1Q8NGR1 328 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 OR13C3Q8NGS6 347 aa10.37□□□□□ -0.75
MRPL55-228ENST00000476267 RNFT2Q96EX2 444 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms