RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 HOGA1Q86XE5 327 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 C11orf53Q8IXP5 236 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 DUSP18Q8NEJ0 188 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 PPP1R35Q8TAP8 253 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 NEUROG1Q92886 237 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 ST6GALNAC5Q9BVH7 336 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 CACNG6Q9BXT2 260 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 HES4Q9HCC6 221 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 RCC2Q9P258 522 aaKnown RBP10.33□□□□□ -0.76
MRPL55-227ENST00000475832 AK3Q9UIJ7 227 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 SCP2D1Q9UJQ7 156 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 PPP1R3CQ9UQK1 317 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 KCNK7Q9Y2U2 307 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 NUBP2Q9Y5Y2 271 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 AKAP9Q99996 3911 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 HCFC1P51610 2035 aa10.33□□□□□ -0.76
MRPL55-227ENST00000475832 POM121CA8CG34 1229 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 SRRM5B3KS81 715 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 HS3ST1O14792 307 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 SSX5O60225 188 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 PLAUP00749 431 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 CD3DP04234 171 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 HLA-DMAP28067 261 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 DUSP1P28562 367 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 SLC6A1P30531 599 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 RFX2P48378 723 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 KCNJ3P48549 501 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 ARPC4P59998 168 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 DAZAP2Q15038 168 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-227ENST00000475832 ZMYND11Q15326 602 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 PAN3Q58A45 887 aaKnown RBP10.32□□□□□ -0.76
MRPL55-227ENST00000475832 RSBN1Q5VWQ0 802 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-227ENST00000475832 SIGIRRQ6IA17 410 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 BOLLQ8N9W6 283 aaKnown RBP10.32□□□□□ -0.76
MRPL55-227ENST00000475832 SUMF2Q8NBJ7 301 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 BEST4Q8NFU0 473 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 OR5H2Q8NGV7 314 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 OR4K15Q8NH41 348 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 Q8TCH9 128 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 CREB3L1Q96BA8 519 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 PRRT1Q99946 306 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 SULT4A1Q9BR01 284 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 DPCDQ9BVM2 203 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-227ENST00000475832 ZNF286AQ9HBT8 521 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 ETAA1Q9NY74 926 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 NLKQ9UBE8 527 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 OR14J1Q9UGF5 321 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 ELF5Q9UKW6 265 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-227ENST00000475832 MGAT4AQ9UM21 535 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 WIPI2Q9Y4P8 454 aa10.32□□□□□ -0.76
MRPL55-227ENST00000475832 SIRPB1O00241 398 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 DHFRP00374 187 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 CD74P04233 296 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 AMY2AP04746 511 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 COX6B1P14854 86 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
MRPL55-227ENST00000475832 NAT1P18440 290 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 GIFP27352 417 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 PPOXP50336 477 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 CCL8P80075 99 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 PDCD1Q15116 288 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 SHEQ5VZ18 495 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 SPNS3Q6ZMD2 512 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 OR4C16Q8NGL9 310 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 RDH5Q92781 318 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 SEBOXQ9HB31 216 aaPredicted RBP10.31□□□□□ -0.76
MRPL55-227ENST00000475832 GCM1Q9NP62 436 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 CBLN4Q9NTU7 201 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 TREM2Q9NZC2 230 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 IL36RNQ9UBH0 155 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 ANAPC10Q9UM13 185 aa10.31□□□□□ -0.76
MRPL55-227ENST00000475832 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.76
MRPL55-227ENST00000475832 hCG_2014768A0A024R1R8 64 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 KIR2DS1A0A191URI9 304 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 A6NNC1 897 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 HSPB6O14558 160 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 SIAH2O43255 324 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 OR2H2O95918 312 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 TCRBP04435 133 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 FCER2P06734 321 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 FCGR3AP08637 254 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 LOXP28300 417 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-227ENST00000475832 KIR2DS4P43632 304 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 TSPAN5P62079 268 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 KIR2DS1Q14954 304 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 KCNJ8Q15842 424 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 SRSF7Q16629 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
MRPL55-227ENST00000475832 SWI5Q1ZZU3 235 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 MICBQ29980 383 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 SFRP4Q6FHJ7 346 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-227ENST00000475832 Q6P435 159 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 BRICD5Q6PL45 260 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 MOB1BQ7L9L4 216 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 ZNF295-AS1Q8N0V1 137 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 BPIFB2Q8N4F0 458 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 ARRDC1Q8N5I2 433 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 GVQW1Q8N7I0 195 aa10.3□□□□□ -0.76
MRPL55-227ENST00000475832 OR5AP2Q8NGF4 316 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms