RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 TFAP2EQ6VUC0 442 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 MEX3BQ6ZN04 569 aaKnown RBP12.06□□□□□ -0.48
UBXN11-214ENST00000475591 GCNT2Q8N0V5 402 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 LRRC46Q96FV0 321 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 PRRX2Q99811 253 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 PIGMQ9H3S5 423 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 TMEM231Q9H6L2 316 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 FBXL17Q9UF56 701 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 DSPP15924 2871 aaKnown RBP12.06□□□□□ -0.48
UBXN11-214ENST00000475591 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 ZNF705EA8MWA4 302 aaPredicted RBP12.05□□□□□ -0.48
UBXN11-214ENST00000475591 TRAPPC2LH3BP13 241 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 K7EPK0 472 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 CA6P23280 308 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 MST1LQ2TV78 715 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 LIAT1Q6ZQX7 453 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 FAM71E2Q8N5Q1 922 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 RNF141Q8WVD5 230 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 OR5P3Q8WZ94 311 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
UBXN11-214ENST00000475591 ERGIC1Q969X5 290 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 AMDHD2Q9Y303 409 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 TNRC6AQ8NDV7 1962 aaKnown RBP12.05□□□□□ -0.48
UBXN11-214ENST00000475591 IGHV3-64DA0A0J9YX35 117 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 FBXO24O75426 580 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 RHBDL1O75783 438 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 FBXW9Q5XUX1 488 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 C20orf204Q6ZNR8 217 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 OR4A4PQ8NGN8 299 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 SECTM1Q8WVN6 248 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 C18orf12Q96KH6 178 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 RSRP1Q9BUV0 290 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 Q9N2K0 584 aa12.05□□□□□ -0.48
UBXN11-214ENST00000475591 ABCD4O14678 606 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 HS3ST1O14792 307 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 NAPSAO96009 420 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 GNRHRP30968 328 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 SMCO1Q147U7 214 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 DEFB124Q8NES8 71 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 HIST1H2AAQ96QV6 131 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 ZDHHC8Q9ULC8 765 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 IGKV1-6A0A0C4DH72 117 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 SPAARA0A1B0GVQ0 90 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 ADCYAP1P18509 176 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 CCL11P51671 97 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 TMEM33P57088 247 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 ERVS71-1P61550 626 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 SLC35G3Q8N808 338 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 OR5A2Q8NGI9 324 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 RDH5Q92781 318 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 SUCNR1Q9BXA5 334 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 HRH4Q9H3N8 390 aa12.04□□□□□ -0.48
UBXN11-214ENST00000475591 RCC2Q9P258 522 aaKnown RBP12.04□□□□□ -0.48
UBXN11-214ENST00000475591 ANKRD30BLA7E2S9 258 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 ATF4P18848 351 aaPredicted RBP12.03□□□□□ -0.48
UBXN11-214ENST00000475591 ID4P47928 161 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 UCP3P55916 312 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 SAXO1Q8IYX7 474 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 ZDHHC11Q9H8X9 412 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 LPAR3Q9UBY5 353 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 TTC28Q96AY4 2481 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 H7C1Q1 480 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 WT1P19544 449 aaPredicted RBP12.03□□□□□ -0.48
UBXN11-214ENST00000475591 PMELP40967 661 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 LPAR6P43657 344 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 TNFSF10P50591 281 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 ZNF273Q14593 569 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 SPIN3Q5JUX0 258 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 TMEM268Q5VZI3 342 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 ZNF818PQ6ZRF7 136 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 SUMF2Q8NBJ7 301 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 SYT3Q9BQG1 590 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 ADAT1Q9BUB4 502 aaKnown RBP12.03□□□□□ -0.48
UBXN11-214ENST00000475591 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
UBXN11-214ENST00000475591 PARD6AQ9NPB6 346 aa12.03□□□□□ -0.48
UBXN11-214ENST00000475591 ESPL1Q14674 2120 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 MED12LQ86YW9 2145 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 C3orf85A0A1B0GTC6 90 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM74A7A6NL05 159 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 CDK2AP1O14519 115 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 MPPED1O15442 326 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 LYZL6O75951 148 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms