RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 VAMP5O95183 116 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 ASS1P00966 412 aaKnown RBP3.33□□□□□ -1.88
SMC5-203ENST00000475540 GRPRP30550 384 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 RCVRNP35243 200 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 CDK5Q00535 292 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 HLA-DRB5Q30154 266 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 MPV17L2Q567V2 206 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 SHISA6Q6ZSJ9 500 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 FAM19A5Q7Z5A7 132 aaPredicted RBP3.33□□□□□ -1.88
SMC5-203ENST00000475540 CALHM1Q8IU99 346 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 C15orf56Q8N910 161 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 C15orf40Q8WUR7 153 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 RMI2Q96E14 147 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 SPACA5Q96QH8 159 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 MRPL20Q9BYC9 149 aaKnown RBP3.33□□□□□ -1.88
SMC5-203ENST00000475540 OR51V1Q9H2C8 321 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
SMC5-203ENST00000475540 FAM206AQ9NX38 181 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 TAS2R9Q9NYW1 312 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 TP53TG1Q9Y2A0 90 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 CABIN1Q9Y6J0 2220 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 SIGLEC1Q9BZZ2 1709 aa3.33□□□□□ -1.88
SMC5-203ENST00000475540 DOCK9Q9BZ29 2069 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 TRAV8-2A0A0B4J237 113 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 IGHV1OR15-9A0A0B4J2B8 117 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 TINCRA0A1B0GVN0 87 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 C7orf66A4D0T2 115 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 PGPA6NDG6 321 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 UPK1AO00322 258 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 EIF1BO60739 113 aaKnown RBP3.32□□□□□ -1.88
SMC5-203ENST00000475540 CNMDO75829 334 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 DHRS3O75911 302 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 OR4Q2P0C623 313 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 MLNP12872 115 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 EIF1P41567 113 aaKnown RBP3.32□□□□□ -1.88
SMC5-203ENST00000475540 AP3S2P59780 193 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 RAP1AP62834 184 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 FAM162BQ5T6X4 162 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 ZNF880Q6PDB4 577 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 TTC33Q6PID6 262 aaPredicted RBP3.32□□□□□ -1.88
SMC5-203ENST00000475540 NEGR1Q7Z3B1 354 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 OR4M1Q8NGD0 313 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 COQ8AQ8NI60 647 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 TMEM208Q9BTX3 173 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 GGTLC1Q9BX51 225 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 HMG20AQ9NP66 347 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 GUCA1BQ9UMX6 200 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 INSIG2Q9Y5U4 225 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 ADAMTS13Q76LX8 1427 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 RIMS2Q9UQ26 1411 aa3.32□□□□□ -1.88
SMC5-203ENST00000475540 TMEM131Q92545 1883 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 BRWD3Q6RI45 1802 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 IGHV5-10-1A0A0J9YXX1 117 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 FAM183AA6NL82 134 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 CHST10O43529 356 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 PDCD6O75340 191 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 GATBO75879 557 aaKnown RBP3.31□□□□□ -1.88
SMC5-203ENST00000475540 YIF1AO95070 293 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 ISG15P05161 165 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 CALB1P05937 261 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 IGHV1-8P0DP01 117 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 SPNP16150 400 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 IFNGR2P38484 337 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 ACTBP60709 375 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 PPP1CAP62136 330 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 GRB2P62993 217 aaKnown RBP3.31□□□□□ -1.88
SMC5-203ENST00000475540 ACTG1P63261 375 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 REEP5Q00765 189 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 FAM53BQ14153 422 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 SNRNP35Q16560 246 aaKnown RBP3.31□□□□□ -1.88
SMC5-203ENST00000475540 Q499Y3 187 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 GUSBP11Q6P575 273 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 TMEM205Q6UW68 189 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 LRRN1Q6UXK5 716 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 CASP12Q6UXS9 341 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 DGAT2L6Q6ZPD8 337 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 CPNE9Q8IYJ1 553 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 LRRC34Q8IZ02 419 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 OR4P4Q8NGL7 312 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 OR52P1PQ8NH57 321 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 PDXPQ96GD0 296 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 FMC1Q96HJ9 113 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 TSGA10Q9BZW7 698 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 SLC22A4Q9H015 551 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 SLC25A31Q9H0C2 315 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 METTL17Q9H7H0 456 aaPredicted RBP3.31□□□□□ -1.88
SMC5-203ENST00000475540 PARP11Q9NR21 331 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 ZNF355PQ9NSJ1 428 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 MARCOQ9UEW3 520 aaPredicted RBP3.31□□□□□ -1.88
SMC5-203ENST00000475540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.31□□□□□ -1.88
SMC5-203ENST00000475540 C2orf16Q68DN1 1984 aa3.31□□□□□ -1.88
SMC5-203ENST00000475540 CCL15-CCL14A0A0B4J2E2 113 aa3.3□□□□□ -1.88
SMC5-203ENST00000475540 A0A0G2JMP0 313 aa3.3□□□□□ -1.88
SMC5-203ENST00000475540 A0A0U1RQV1 116 aa3.3□□□□□ -1.88
SMC5-203ENST00000475540 A0A0X1KG70 313 aa3.3□□□□□ -1.88
SMC5-203ENST00000475540 LOC389332A0A1B0GUA5 103 aa3.3□□□□□ -1.88
SMC5-203ENST00000475540 A0A1B0GVX0 72 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms