RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 FAM219AQ8IW50 185 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 DUSP18Q8NEJ0 188 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 RNF24Q9Y225 148 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 PI4KAP42356 2102 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 TRAV39A0A0B4J263 110 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 CST4P01036 141 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 CD40P25942 277 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 OR6X1Q8NH79 312 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 TMUB1Q9BVT8 246 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 TINAGQ9UJW2 476 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 FCN1O00602 326 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 GP1BAP07359 652 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 CCL3P10147 92 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 MOGAT2Q3SYC2 334 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 FAM24BQ8N5W8 94 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 CEACAM3P40198 252 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 OR2C3Q8N628 320 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 PTPMT1Q8WUK0 201 aaPredicted RBP9.68□□□□□ -0.86
VAPB-204ENST00000475243 SH2D2AQ9NP31 389 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 ZNF831Q5JPB2 1677 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 IGHV3-21A0A0B4J1V1 117 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 MAP1LC3B2A6NCE7 125 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 CSN3P07498 182 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 TOMM20LQ6UXN7 152 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 KLHDC1Q8N7A1 406 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 RNF2Q99496 336 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 MAP1LC3BQ9GZQ8 125 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 MRM2Q9UI43 246 aaKnown RBP9.68□□□□□ -0.86
VAPB-204ENST00000475243 S100A8P05109 93 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 KIR2DS2P43631 304 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 PMS2P11Q13670 270 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 OR4D11Q8NGI4 311 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 SLC17A5Q9NRA2 495 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 TUBAL3A6NHL2 446 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 MPC2O95563 127 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 ACP1P24666 158 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 FLYWCH2Q96CP2 140 aaKnown RBP9.67□□□□□ -0.86
VAPB-204ENST00000475243 RASL11BQ9BPW5 248 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 SRD5A3Q9H8P0 318 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 COL18A1P39060 1754 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 F2RL2O00254 374 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 LANCL1O43813 399 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 PIGYQ3MUY2 71 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 SLC25A30Q5SVS4 291 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 OR8B3Q8NGG8 313 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 OR10D4PQ8NGN7 298 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 OR8B2Q96RD0 313 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 TRDCB7Z8K6 153 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 HAND1O96004 215 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 OR4A4PQ8NGN8 299 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 DYRK2Q92630 601 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 TUBGCP6Q96RT7 1819 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 HEATR1Q9H583 2144 aaKnown RBP9.67□□□□□ -0.86
VAPB-204ENST00000475243 HOXC4P09017 264 aaPredicted RBP9.67□□□□□ -0.86
VAPB-204ENST00000475243 MOB1BQ7L9L4 216 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 OR2Y1Q8NGV0 311 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 SSMEM1Q8WWF3 244 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 TOLLIPQ9H0E2 274 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 SLC45A2Q9UMX9 530 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 INSIG2Q9Y5U4 225 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 DIDO1Q9BTC0 2240 aaKnown RBP9.67□□□□□ -0.86
VAPB-204ENST00000475243 MRPS11P82912 194 aaKnown RBP9.67□□□□□ -0.86
VAPB-204ENST00000475243 TMEM97Q5BJF2 176 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 OR4C5Q8NGB2 326 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 ZNF385DQ9H6B1 395 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
VAPB-204ENST00000475243 PNPP00491 289 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 MESTQ5EB52 335 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 OR5B21A6NL26 309 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 FGF9P31371 208 aaPredicted RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 TCL1AP56279 114 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 ZNF770Q6IQ21 691 aaPredicted RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 TRAT1Q6PIZ9 186 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 WDR74Q6RFH5 385 aaPredicted RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 PDPNQ86YL7 162 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 LINC00052Q96N35 136 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 USP54Q70EL1 1684 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 GRAMD2BQ96HH9 432 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 OOEPA6NGQ2 149 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 SPINT1O43278 529 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 HPXP02790 462 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 GABRA1P14867 456 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 RPL7P18124 248 aaKnown RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 ZNF154Q13106 437 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 JMJD6Q6NYC1 403 aaPredicted RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 DEGS2Q6QHC5 323 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 NUFIP2Q7Z417 695 aaKnown RBP9.66□□□□□ -0.86
VAPB-204ENST00000475243 ASB13Q8WXK3 278 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 IL22RA2Q969J5 263 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 R3HDM4Q96D70 268 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 ABCA3Q99758 1704 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 DLEC1Q9Y238 1755 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 CHST1O43916 411 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 GNG7O60262 68 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 REG1BP48304 166 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 RPEL1Q2QD12 228 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 FAM78BQ5VT40 261 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms