RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PGLYRP1O75594 196 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 NUDT3O95989 172 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CSN2P05814 226 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CXCL3P19876 107 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TNFSF8P32971 234 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 POLR2HP52434 150 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 CRISP3P54108 245 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CLDN15P56746 228 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 OR1D5P58170 312 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CTXN1P60606 82 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 EIF5AP63241 154 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 TNFAIP6P98066 277 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 TP53I3Q53FA7 332 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TMUB2Q71RG4 321 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CLEC14AQ86T13 490 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 PRR26Q8N8Z3 221 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 OR1S2Q8NGQ3 325 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SLC38A5Q8WUX1 472 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 VOPP1Q96AW1 172 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SGK494Q96LW2 274 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CARD19Q96LW7 228 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SEC61A2Q9H9S3 476 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 NOX3Q9HBY0 568 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 C1orf123Q9NWV4 160 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 HIGD1AQ9Y241 93 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ZNF443Q9Y2A4 671 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 FAM96BQ9Y3D0 163 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ZNF780BQ9Y6R6 833 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 DISP2A7MBM2 1401 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 J3KT08 172 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 RHODO00212 210 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SOCS2O14508 198 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 TAAR5O14804 337 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 MPPED1O15442 326 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SPRY3O43610 288 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SLC37A4O43826 429 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 HLA-DQB1P01920 261 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 ATF1P18846 271 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 AOC1P19801 751 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 EVI2AP22794 236 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 MPGP29372 298 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 RPL3P39023 403 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 GNG4P50150 75 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 UBE2V2Q15819 145 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 DOK7Q18PE1 504 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 OTPQ5XKR4 325 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 CD276Q5ZPR3 534 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 OLFML2AQ68BL7 652 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 EIF5AL1Q6IS14 154 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 CD164L2Q6UWJ8 174 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 IGFL2Q6UWQ7 119 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 TMEM183AQ8IXX5 376 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 C20orf196Q8IYI0 205 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 FAM24BQ8N5W8 94 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 OR2A12Q8NGT7 310 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SLC25A33Q9BSK2 321 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 POLR2J3Q9H1A7 115 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 NPVFQ9HCQ7 196 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 LSM7Q9UK45 103 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 R4GN57 208 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SPHKAPQ2M3C7 1700 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 FAM236DA0A1B0GTK5 79 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 FAM236CP0DP71 79 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 ADH5P11766 374 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 NTF3P20783 257 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 OR1D4P47884 311 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 LSM3P62310 102 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 SRSF3P84103 164 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 CD164Q04900 197 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 ACOT6Q3I5F7 207 aaPredicted RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 Q5XG85 94 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 DDB2Q92466 427 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 TMEM106AQ96A25 262 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 MBD6Q96DN6 1003 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 BPIFA1Q9NP55 256 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 EXOSC4Q9NPD3 245 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 ACOT13Q9NPJ3 140 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 MCTS1Q9ULC4 181 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 PTPRMP28827 1452 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 BCL9LQ86UU0 1499 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 TRAV19A0A0A6YYK7 116 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 A0A0G2JND7 137 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 M0R2Z0 102 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SYNGR1O43759 233 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 GABRG2P18507 467 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 DUTP33316 252 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 GABRA3P34903 492 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 LHX2P50458 406 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SSR4P51571 173 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 GABARAPL2P60520 117 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 SSX1Q16384 188 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 LRRC10Q5BKY1 277 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 TREML2Q5T2D2 321 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 AMMECR1LQ6DCA0 310 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 OR2T5Q6IEZ7 315 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 LIAT1Q6ZQX7 453 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 GLCCI1Q86VQ1 547 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 EXOC3-AS1Q8N2X6 119 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 WDR31Q8NA23 367 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 TEX45Q8NA69 505 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms