RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 DISC1C4P0D8 188 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 SLC33A1O00400 549 aaPredicted RBP8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 TMPRSS2O15393 492 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF205O95201 554 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 LHBP01229 141 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 CD8AP01732 235 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 GYPAP02724 150 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 MELTFP08582 738 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 PSG2P11465 335 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 PTHLHP12272 177 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 EGR1P18146 543 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 TBPP20226 339 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 DTYMKP23919 212 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 KIR2DS4P43632 304 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 CEBPDP49716 269 aaPredicted RBP8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 TAS2R46P59540 309 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 BTG1P62324 171 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 MEF2DQ14814 521 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 KIR2DS1Q14954 304 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 ATXN7L3Q14CW9 347 aaPredicted RBP8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 BAK1Q16611 211 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 TRIM16LQ309B1 348 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 LRRC10Q5BKY1 277 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 RNASE10Q5GAN6 216 aaKnown RBP8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 PLAC9Q5JTB6 97 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 TEX36Q5VZQ5 186 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 STEAP3Q658P3 488 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM17Q86X19 198 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 LYSMD2Q8IV50 215 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 BPIFB2Q8N4F0 458 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 SPICQ8N5J4 248 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 OR5H2Q8NGV7 314 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 GPX8Q8TED1 209 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 ST8SIA4Q92187 359 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 YIPF5Q969M3 257 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 MARVELD3Q96A59 401 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 SEH1LQ96EE3 360 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 SNX22Q96L94 193 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 SULT4A1Q9BR01 284 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 ST6GALNAC5Q9BVH7 336 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 DNTTIP1Q9H147 329 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 CHODLQ9H9P2 273 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 RCC2Q9P258 522 aaKnown RBP8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 MTFP1Q9UDX5 166 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF107Q9UII5 783 aaPredicted RBP8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 CACNA1DQ01668 2161 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 DSCAMO60469 2012 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 MEIOCA2RUB1 952 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 FAM221AA4D161 298 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 MGST3O14880 152 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 LYRM1O43325 122 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 ADAM20O43506 726 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 NDUFB3O43676 98 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 ORC5O43913 435 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 RAB3DO95716 219 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 F12P00748 615 aaPredicted RBP8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 FCER2P06734 321 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 NDUFB7P17568 137 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 GLP1RP43220 463 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 GPR6P46095 362 aaPredicted RBP8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 PDLIM4P50479 330 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM50BP56557 158 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 EDDM3BP56851 147 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 DYRK1AQ13627 763 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 EDDM3AQ14507 147 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 SPRNQ5BIV9 151 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 KRBOX4Q5JUW0 171 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 C6orf183Q5T699 404 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 STUMQ69YW2 141 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 TRAT1Q6PIZ9 186 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF782Q6ZMW2 699 aaPredicted RBP8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 DCDC5Q6ZRR9 648 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 BIVMQ86UB2 503 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM229BQ8NBD8 167 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 MINDY2Q8NBR6 621 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 BEST4Q8NFU0 473 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 PLEKHF2Q9H8W4 249 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 SEBOXQ9HB31 216 aaPredicted RBP8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 CACNG2Q9Y698 323 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 ARFGEF3Q5TH69 2177 aa8.62□□□□□ -1.03
PRPF38A-202ENST00000474048 RAI1Q7Z5J4 1906 aaPredicted RBP8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 IGKV1D-17A0A075B6S4 117 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 MEIKINA0A087WXM9 373 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 TRAV24A0A0B4J272 114 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 FAM240BA0A1B0GVZ2 78 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 A0A1W2PPR1 153 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 ANKRD20A5PA0PJZ0 165 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 FOXI3A8MTJ6 420 aaPredicted RBP8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 PTTG1O95997 202 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 HEXAP06865 529 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 FCGR3AP08637 254 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 RPS2P15880 293 aaKnown RBP8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 DNASE1P24855 282 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 HLA-DMAP28067 261 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms